Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.59□□□□□ -2.15
CMC4P56277 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.59□□□□□ -2.15
CMC4P56277 MTND4P2-201ENST00000507767 1203 ntBASIC1.59□□□□□ -2.15
CMC4P56277 MTND1P22-201ENST00000510572 951 ntBASIC1.59□□□□□ -2.15
CMC4P56277 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.59□□□□□ -2.15
CMC4P56277 RNU6-1129P-201ENST00000515964 104 ntBASIC1.59□□□□□ -2.15
CMC4P56277 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.59□□□□□ -2.15
CMC4P56277 AL138976.2-201ENST00000563989 694 ntBASIC1.59□□□□□ -2.15
CMC4P56277 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.59□□□□□ -2.15
CMC4P56277 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.59□□□□□ -2.15
CMC4P56277 AL451064.1-201ENST00000607718 471 ntBASIC1.59□□□□□ -2.15
CMC4P56277 AL359547.2-201ENST00000615810 418 ntBASIC1.59□□□□□ -2.15
CMC4P56277 MIR5739-201ENST00000619803 80 ntBASIC1.59□□□□□ -2.15
CMC4P56277 AC009878.1-201ENST00000621819 340 ntBASIC1.59□□□□□ -2.15
CMC4P56277 AC103710.2-202ENST00000641454 2853 ntBASIC1.59□□□□□ -2.16
CMC4P56277 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CMC4P56277 AC006020.1-201ENST00000420179 1854 ntBASIC1.58□□□□□ -2.16
CMC4P56277 HAUS6P2-201ENST00000433254 2404 ntBASIC1.58□□□□□ -2.16
CMC4P56277 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CMC4P56277 AL139276.1-201ENST00000311910 1001 ntBASIC1.58□□□□□ -2.16
CMC4P56277 SNORD56.2-201ENST00000363242 71 ntBASIC1.58□□□□□ -2.16
CMC4P56277 RNA5SP240-201ENST00000365355 128 ntBASIC1.58□□□□□ -2.16
CMC4P56277 OR5H15-201ENST00000383696 930 ntBASIC1.58□□□□□ -2.16
CMC4P56277 RN7SKP223-201ENST00000410582 62 ntBASIC1.58□□□□□ -2.16
CMC4P56277 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CMC4P56277 AC092809.3-201ENST00000415453 231 ntBASIC1.58□□□□□ -2.16
CMC4P56277 HIGD1AP15-201ENST00000416198 280 ntBASIC1.58□□□□□ -2.16
CMC4P56277 NPM1P11-201ENST00000417106 855 ntBASIC1.58□□□□□ -2.16
CMC4P56277 USP9YP27-201ENST00000418455 438 ntBASIC1.58□□□□□ -2.16
CMC4P56277 Z99497.1-201ENST00000421282 135 ntBASIC1.58□□□□□ -2.16
CMC4P56277 RPL23AP30-201ENST00000432419 501 ntBASIC1.58□□□□□ -2.16
CMC4P56277 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.58□□□□□ -2.16
CMC4P56277 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.58□□□□□ -2.16
CMC4P56277 CYP2C59P-201ENST00000457790 269 ntBASIC1.58□□□□□ -2.16
CMC4P56277 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.58□□□□□ -2.16
CMC4P56277 AC068781.1-201ENST00000488231 618 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.58□□□□□ -2.16
CMC4P56277 FAM92A1P2-202ENST00000504766 877 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC010587.1-201ENST00000505809 469 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.58□□□□□ -2.16
CMC4P56277 RNU6-415P-201ENST00000516252 97 ntBASIC1.58□□□□□ -2.16
CMC4P56277 Y_RNA.689-201ENST00000516589 107 ntBASIC1.58□□□□□ -2.16
CMC4P56277 RNA5SP82-201ENST00000516707 92 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC025881.1-201ENST00000518851 512 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC022878.1-201ENST00000530684 149 ntBASIC1.58□□□□□ -2.16
CMC4P56277 OR5B19P-201ENST00000531766 928 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC118273.2-201ENST00000532092 465 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.58□□□□□ -2.16
CMC4P56277 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.58□□□□□ -2.16
CMC4P56277 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
CMC4P56277 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
CMC4P56277 AC025165.5-201ENST00000602802 578 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC096772.1-201ENST00000609146 564 ntBASIC1.58□□□□□ -2.16
CMC4P56277 AC010378.1-201ENST00000619270 362 ntBASIC1.58□□□□□ -2.16
CMC4P56277 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
CMC4P56277 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CMC4P56277 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CMC4P56277 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.57□□□□□ -2.16
CMC4P56277 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CMC4P56277 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CMC4P56277 OR56A5-201ENST00000340110 738 ntBASIC1.57□□□□□ -2.16
CMC4P56277 MIR412-201ENST00000362142 91 ntBASIC1.57□□□□□ -2.16
CMC4P56277 RNU6-487P-201ENST00000365430 104 ntBASIC1.57□□□□□ -2.16
CMC4P56277 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.57□□□□□ -2.16
CMC4P56277 SNORA75B-201ENST00000384053 137 ntBASIC1.57□□□□□ -2.16
CMC4P56277 RNU6-301P-201ENST00000384277 107 ntBASIC1.57□□□□□ -2.16
CMC4P56277 SNORA3.2-201ENST00000408221 125 ntBASIC1.57□□□□□ -2.16
CMC4P56277 U3.37-201ENST00000408528 213 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.57□□□□□ -2.16
CMC4P56277 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 AL593851.1-201ENST00000426171 157 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 AL627311.1-201ENST00000431514 115 ntBASIC1.57□□□□□ -2.16
CMC4P56277 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.57□□□□□ -2.16
CMC4P56277 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.57□□□□□ -2.16
CMC4P56277 IPO7P1-201ENST00000442031 636 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.57□□□□□ -2.16
CMC4P56277 RPL7P12-201ENST00000446719 750 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 RPL30P6-201ENST00000475925 342 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AP000797.1-201ENST00000478870 387 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC011005.2-201ENST00000487324 359 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC005178.1-201ENST00000508392 440 ntBASIC1.57□□□□□ -2.16
CMC4P56277 RPL23AP94-201ENST00000512518 302 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC008549.1-201ENST00000512900 643 ntBASIC1.57□□□□□ -2.16
CMC4P56277 SMURF2P1-201ENST00000514992 481 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC109329.1-201ENST00000518744 317 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 CBX3P7-201ENST00000532876 502 ntBASIC1.57□□□□□ -2.16
CMC4P56277 CYCSP26-201ENST00000534107 320 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.57□□□□□ -2.16
CMC4P56277 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.57□□□□□ -2.16
CMC4P56277 AC136619.2-201ENST00000563361 631 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC009094.1-201ENST00000564443 426 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AL138889.2-201ENST00000603883 242 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC105129.3-201ENST00000605455 485 ntBASIC1.57□□□□□ -2.16
CMC4P56277 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms