Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC012493.2-201ENST00000595083 291 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC005261.5-201ENST00000596280 355 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC019159.1-201ENST00000605094 187 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH13P55290 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH13P55290 AC006020.1-201ENST00000420179 1854 ntBASIC2.73□□□□□ -1.97
CDH13P55290 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH13P55290 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-552P-201ENST00000362869 119 ntBASIC2.72□□□□□ -1.97
CDH13P55290 Y_RNA.255-201ENST00000364581 97 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-715P-201ENST00000365204 103 ntBASIC2.72□□□□□ -1.97
CDH13P55290 SNORA70.4-201ENST00000365509 134 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-1083P-201ENST00000384022 107 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-45P-201ENST00000384471 107 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-19P-201ENST00000384718 107 ntBASIC2.72□□□□□ -1.97
CDH13P55290 U3.26-201ENST00000391236 204 ntBASIC2.72□□□□□ -1.97
CDH13P55290 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDH13P55290 AC068050.1-201ENST00000394891 380 ntBASIC2.72□□□□□ -1.97
CDH13P55290 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH13P55290 U3.37-201ENST00000408528 213 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RNU6-607P-201ENST00000411283 108 ntBASIC2.72□□□□□ -1.97
CDH13P55290 PTGES3P4-201ENST00000426243 356 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AL589823.1-201ENST00000429577 183 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH13P55290 AC000111.3-201ENST00000433478 193 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC073415.1-201ENST00000449240 153 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC092001.1-201ENST00000453012 261 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
CDH13P55290 SNRPFP3-201ENST00000457792 225 ntBASIC2.72□□□□□ -1.97
CDH13P55290 snoU13.22-201ENST00000459428 104 ntBASIC2.72□□□□□ -1.97
CDH13P55290 SRRM1P2-201ENST00000464531 1192 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC083798.1-201ENST00000472671 131 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RPS27AP9-201ENST00000477681 438 ntBASIC2.72□□□□□ -1.97
CDH13P55290 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC011005.2-201ENST00000487324 359 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CDH13P55290 SNORA9.3-201ENST00000516383 129 ntBASIC2.72□□□□□ -1.97
CDH13P55290 MIR892C-201ENST00000516410 77 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AL512310.1-201ENST00000548639 172 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC093536.2-201ENST00000565257 1406 ntBASIC2.72□□□□□ -1.97
CDH13P55290 LRRC37A5P-203ENST00000580181 585 ntBASIC2.72□□□□□ -1.97
CDH13P55290 MIR5195-201ENST00000583555 115 ntBASIC2.72□□□□□ -1.97
CDH13P55290 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH13P55290 MTND4P14-201ENST00000435799 1354 ntBASIC2.72□□□□□ -1.97
CDH13P55290 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH13P55290 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH13P55290 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
CDH13P55290 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDH13P55290 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.97
CDH13P55290 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH13P55290 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CDH13P55290 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH13P55290 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.71□□□□□ -1.98
CDH13P55290 Y_RNA.41-201ENST00000362646 102 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-1085P-201ENST00000363576 107 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-384P-201ENST00000364900 104 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-748P-201ENST00000384648 107 ntBASIC2.71□□□□□ -1.98
CDH13P55290 MIR10A-201ENST00000385043 110 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL138885.1-201ENST00000405921 675 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL513477.1-202ENST00000417061 214 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL669831.1-202ENST00000428504 417 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH13P55290 AL606489.2-201ENST00000433886 234 ntBASIC2.71□□□□□ -1.98
CDH13P55290 GTF2IP13-201ENST00000438487 386 ntBASIC2.71□□□□□ -1.98
CDH13P55290 Z96811.1-201ENST00000445880 108 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-261P-201ENST00000459506 102 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RPS29P26-201ENST00000477483 171 ntBASIC2.71□□□□□ -1.98
CDH13P55290 GZMAP1-201ENST00000503054 631 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC079140.5-201ENST00000507882 310 ntBASIC2.71□□□□□ -1.98
CDH13P55290 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH13P55290 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-581P-201ENST00000516214 105 ntBASIC2.71□□□□□ -1.98
CDH13P55290 SNORA74D-201ENST00000516404 141 ntBASIC2.71□□□□□ -1.98
CDH13P55290 RNU6-1178P-201ENST00000516674 107 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
CDH13P55290 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH13P55290 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL137161.1-201ENST00000532231 390 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH13P55290 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC073539.2-201ENST00000597113 165 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL359198.2-201ENST00000611836 194 ntBASIC2.71□□□□□ -1.98
CDH13P55290 uc_338.14-201ENST00000613162 166 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AL354950.2-201ENST00000617939 290 ntBASIC2.71□□□□□ -1.98
CDH13P55290 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH13P55290 MIR3651-201ENST00000630427 90 ntBASIC2.71□□□□□ -1.98
CDH13P55290 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.98
CDH13P55290 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH13P55290 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH13P55290 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CDH13P55290 AC004520.1-201ENST00000608362 1413 ntBASIC2.7□□□□□ -1.98
CDH13P55290 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH13P55290 RNA5SP387-201ENST00000364226 106 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU1-100P-201ENST00000365255 165 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-434P-201ENST00000384376 107 ntBASIC2.7□□□□□ -1.98
CDH13P55290 RNU6-393P-201ENST00000384475 107 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms