Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC104073.3-201ENST00000610942 955 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC136475.10-201ENST00000620253 385 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC139792.2-201ENST00000624218 587 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AL049641.1-201ENST00000441055 1948 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC007785.2-201ENST00000598627 1916 ntBASIC2.5□□□□□ -2.01
HMGCS2P54868 AC022336.2-201ENST00000568966 2538 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
HMGCS2P54868 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 ZNF72P-201ENST00000425869 1908 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RNU6-270P-201ENST00000364131 105 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 MIR558-201ENST00000384920 94 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 Y_RNA.582-201ENST00000391023 95 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RNU2-33P-201ENST00000410344 192 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RPL19P1-201ENST00000411635 428 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.49□□□□□ -2.01
HMGCS2P54868 MTCO3P41-201ENST00000414801 328 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGCS2P54868 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGCS2P54868 DNAJC19P4-201ENST00000440115 345 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.49□□□□□ -2.01
HMGCS2P54868 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RPS27P27-201ENST00000498779 255 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AC138853.1-201ENST00000503549 823 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.49□□□□□ -2.01
HMGCS2P54868 RPL37P25-201ENST00000507308 276 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.49□□□□□ -2.01
HMGCS2P54868 RN7SKP298-201ENST00000515950 94 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 RNA5SP471-201ENST00000516971 106 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.49□□□□□ -2.01
HMGCS2P54868 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGCS2P54868 TRAV28-201ENST00000557548 323 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC005498.1-201ENST00000592125 465 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AC078795.2-201ENST00000602835 1252 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AC091805.2-201ENST00000603848 235 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AL022154.1-201ENST00000604698 785 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 MIR98-201ENST00000606724 119 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AL161734.1-201ENST00000609720 557 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC072046.2-201ENST00000618366 268 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 UCA1.1-201ENST00000620952 75 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.49□□□□□ -2.01
HMGCS2P54868 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 AC092881.1-201ENST00000638218 2733 ntBASIC2.49□□□□□ -2.01
HMGCS2P54868 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HMGCS2P54868 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HMGCS2P54868 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.48□□□□□ -2.01
HMGCS2P54868 Y_RNA.41-201ENST00000362646 102 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RNU6-181P-201ENST00000363225 107 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 U8.13-201ENST00000390842 128 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC114491.1-201ENST00000416095 246 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.48□□□□□ -2.01
HMGCS2P54868 MTCO2P11-201ENST00000431069 680 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AL445646.1-201ENST00000431784 216 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RPL23AP30-201ENST00000432419 501 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGCS2P54868 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HMGCS2P54868 AC132479.1-201ENST00000449160 144 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 C1DP4-201ENST00000455429 424 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC007182.2-201ENST00000489251 402 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGCS2P54868 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.48□□□□□ -2.01
HMGCS2P54868 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RNU7-51P-201ENST00000516560 62 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RNU6-445P-201ENST00000516949 107 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 OR5B19P-201ENST00000531766 928 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC022880.1-201ENST00000534017 973 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGCS2P54868 AC024619.4-201ENST00000580924 316 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.48□□□□□ -2.01
HMGCS2P54868 AC004223.2-201ENST00000590309 544 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC002545.1-201ENST00000592511 181 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AL136363.2-201ENST00000604173 851 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 RPL23AP88-201ENST00000605759 454 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AL121992.2-201ENST00000606262 256 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AL359198.2-201ENST00000611836 194 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 AC034102.8-201ENST00000615146 484 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.48□□□□□ -2.01
HMGCS2P54868 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HMGCS2P54868 AC002543.1-201ENST00000299783 1954 ntBASIC2.48□□□□□ -2.01
HMGCS2P54868 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HMGCS2P54868 MTND5P26-201ENST00000426018 1752 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU6-741P-201ENST00000383889 107 ntBASIC2.47□□□□□ -2.01
HMGCS2P54868 RNU1-109P-201ENST00000383960 147 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms