Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RPL21P41-201ENST00000459863 264 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RPL7P5-201ENST00000471472 736 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RPL31P13-201ENST00000484151 370 ntBASIC3.45□□□□□ -1.86
COPB1P53618 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.45□□□□□ -1.86
COPB1P53618 TRBVA-201ENST00000498804 316 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SUMO2P6-201ENST00000505273 288 ntBASIC3.45□□□□□ -1.86
COPB1P53618 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.45□□□□□ -1.86
COPB1P53618 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.45□□□□□ -1.86
COPB1P53618 SNORA14.1-201ENST00000516113 141 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SNORA70.16-201ENST00000516390 95 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RNU6-1069P-201ENST00000516612 133 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RNU6-256P-201ENST00000516747 97 ntBASIC3.45□□□□□ -1.86
COPB1P53618 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.45□□□□□ -1.86
COPB1P53618 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
COPB1P53618 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.45□□□□□ -1.86
COPB1P53618 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.45□□□□□ -1.86
COPB1P53618 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.45□□□□□ -1.86
COPB1P53618 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.45□□□□□ -1.86
COPB1P53618 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
COPB1P53618 AC118273.1-201ENST00000525324 3006 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.44□□□□□ -1.86
COPB1P53618 MTND5P27-201ENST00000428871 1720 ntBASIC3.44□□□□□ -1.86
COPB1P53618 UBE2L2-201ENST00000254302 429 ntBASIC3.44□□□□□ -1.86
COPB1P53618 Y_RNA.135-201ENST00000363439 95 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RNA5SP267-201ENST00000364893 126 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RNU6-45P-201ENST00000384471 107 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RNU4-14P-201ENST00000410858 122 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AL354751.2-201ENST00000415471 210 ntBASIC3.44□□□□□ -1.86
COPB1P53618 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 AC008155.2-201ENST00000464337 397 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AC087884.1-201ENST00000469738 328 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RN7SL807P-201ENST00000470923 297 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 AL359273.1-201ENST00000510918 627 ntBASIC3.44□□□□□ -1.86
COPB1P53618 Y_RNA.682-201ENST00000516457 100 ntBASIC3.44□□□□□ -1.86
COPB1P53618 RNU6-566P-201ENST00000516790 107 ntBASIC3.44□□□□□ -1.86
COPB1P53618 SNORA25.17-201ENST00000517184 124 ntBASIC3.44□□□□□ -1.86
COPB1P53618 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.44□□□□□ -1.86
COPB1P53618 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.44□□□□□ -1.86
COPB1P53618 MIR5692C1-201ENST00000585309 91 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AC023043.2-201ENST00000589678 1026 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AC012119.1-201ENST00000603184 222 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AL161798.1-201ENST00000604630 131 ntBASIC3.44□□□□□ -1.86
COPB1P53618 ATP1B3P1-201ENST00000605365 821 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AL133255.1-201ENST00000606374 441 ntBASIC3.44□□□□□ -1.86
COPB1P53618 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
COPB1P53618 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.44□□□□□ -1.86
COPB1P53618 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.44□□□□□ -1.86
COPB1P53618 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COPB1P53618 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
COPB1P53618 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COPB1P53618 AL049781.1-201ENST00000623195 3585 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.43□□□□□ -1.86
COPB1P53618 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COPB1P53618 RNU6-1167P-201ENST00000363227 94 ntBASIC3.43□□□□□ -1.86
COPB1P53618 SNORA38.1-201ENST00000364172 131 ntBASIC3.43□□□□□ -1.86
COPB1P53618 Y_RNA.384-201ENST00000383909 102 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AL356057.2-201ENST00000403318 432 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.43□□□□□ -1.86
COPB1P53618 AC005019.1-201ENST00000436455 431 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.43□□□□□ -1.86
COPB1P53618 AL360271.2-201ENST00000447710 161 ntBASIC3.43□□□□□ -1.86
COPB1P53618 SNORD19B-201ENST00000459623 84 ntBASIC3.43□□□□□ -1.86
COPB1P53618 RPL37P6-201ENST00000460682 294 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AP002884.2-201ENST00000471647 395 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AC117503.1-201ENST00000472241 394 ntBASIC3.43□□□□□ -1.86
COPB1P53618 RPS20P22-201ENST00000473700 357 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.43□□□□□ -1.86
COPB1P53618 TBCAP3-201ENST00000512475 312 ntBASIC3.43□□□□□ -1.86
COPB1P53618 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
COPB1P53618 RNA5SP454-201ENST00000517231 127 ntBASIC3.43□□□□□ -1.86
COPB1P53618 MIR3941-201ENST00000582572 103 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AC073539.2-201ENST00000597113 165 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.43□□□□□ -1.86
COPB1P53618 AC098826.3-201ENST00000603823 466 ntBASIC3.43□□□□□ -1.86
COPB1P53618 AL138726.1-201ENST00000614873 333 ntBASIC3.43□□□□□ -1.86
COPB1P53618 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.43□□□□□ -1.86
COPB1P53618 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
COPB1P53618 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.43□□□□□ -1.86
COPB1P53618 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COPB1P53618 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
COPB1P53618 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COPB1P53618 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.42□□□□□ -1.86
COPB1P53618 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
COPB1P53618 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
COPB1P53618 RNU6-512P-201ENST00000364438 103 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms