Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SCARNA18-201ENST00000459004 134 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 HMGN2P26-201ENST00000463169 339 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 MTND4P7-201ENST00000523876 130 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AC078814.3-201ENST00000553036 491 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.99□□□□□ -1.93
CLCNKAP51800 RNU6-89P-201ENST00000606519 100 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.99□□□□□ -1.93
CLCNKAP51800 MTND5P7-201ENST00000413558 1798 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 MTND4P35-201ENST00000604257 1375 ntBASIC2.99□□□□□ -1.93
CLCNKAP51800 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCNKAP51800 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLCNKAP51800 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CLCNKAP51800 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLCNKAP51800 Y_RNA.378-201ENST00000365652 113 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLCNKAP51800 AL592114.1-201ENST00000403842 483 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 RPL5P18-201ENST00000406671 891 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 RNA5SP118-201ENST00000410385 109 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 Y_RNA.604-201ENST00000410574 102 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AC138393.2-201ENST00000414742 246 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCNKAP51800 AL669831.1-202ENST00000428504 417 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AL591704.1-201ENST00000432574 275 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 ERLEC1P1-201ENST00000433806 578 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AC244505.4-201ENST00000434905 287 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 GTF2IP13-201ENST00000438487 386 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 SSXP5-201ENST00000443473 287 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCNKAP51800 MTCO2P30-201ENST00000503662 364 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCNKAP51800 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCNKAP51800 RNU6-143P-201ENST00000516942 93 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 RNU6-1315P-201ENST00000517187 99 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AP000867.2-201ENST00000532468 320 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AL121579.1-201ENST00000555129 305 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCNKAP51800 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCNKAP51800 DUSP12P1-201ENST00000612874 516 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AL161629.2-201ENST00000615347 275 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 ATP5A1P2-202ENST00000616464 443 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CLCNKAP51800 AC090617.10-201ENST00000624308 134 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AP003400.5-201ENST00000624827 617 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLCNKAP51800 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 AC000403.1-201ENST00000613696 3585 ntBASIC2.98□□□□□ -1.93
CLCNKAP51800 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCNKAP51800 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLCNKAP51800 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
CLCNKAP51800 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
CLCNKAP51800 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.97□□□□□ -1.93
CLCNKAP51800 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCNKAP51800 AC073325.2-201ENST00000339545 159 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 SNORA51.4-201ENST00000364993 124 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCNKAP51800 MIR578-201ENST00000384828 96 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 SNORA16.2-201ENST00000390991 127 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 SNORD70.1-201ENST00000391007 85 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 NDUFB4P4-201ENST00000404822 243 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCNKAP51800 RNU6-373P-201ENST00000411247 98 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCNKAP51800 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.97□□□□□ -1.93
CLCNKAP51800 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCNKAP51800 RPL35AP12-201ENST00000425362 338 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 RPL23AP11-201ENST00000475260 469 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 TRBV1-201ENST00000476502 284 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 RPL21P93-201ENST00000480465 489 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 RPS15AP34-201ENST00000487776 387 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC139453.3-201ENST00000493276 369 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.97□□□□□ -1.93
CLCNKAP51800 Y_RNA.665-201ENST00000516177 98 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 SNORA20.3-201ENST00000516880 132 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 RNA5SP165-201ENST00000517142 115 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AP003122.3-201ENST00000526316 255 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 CENPUP1-201ENST00000526649 1202 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC084851.1-201ENST00000529105 249 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCNKAP51800 AC023050.3-201ENST00000541142 333 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC022080.3-201ENST00000544433 482 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCNKAP51800 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCNKAP51800 BNIP3P10-201ENST00000605360 577 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC004805.2-201ENST00000605382 482 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AL355073.2-201ENST00000612106 557 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCNKAP51800 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC138915.1-201ENST00000565427 1685 ntBASIC2.97□□□□□ -1.93
CLCNKAP51800 AC096644.4-201ENST00000563417 2912 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms