Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.04□□□□□ -1.92
CENPAP49450 BRK1P2-201ENST00000442875 223 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AL078601.1-201ENST00000444542 271 ntBASIC3.04□□□□□ -1.92
CENPAP49450 RPL26P9-201ENST00000457466 433 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AC146507.2-201ENST00000460608 476 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AP000852.1-201ENST00000472460 573 ntBASIC3.04□□□□□ -1.92
CENPAP49450 RPL21P13-201ENST00000488305 481 ntBASIC3.04□□□□□ -1.92
CENPAP49450 SNORA19.2-201ENST00000516013 114 ntBASIC3.04□□□□□ -1.92
CENPAP49450 MIR2276-201ENST00000516886 89 ntBASIC3.04□□□□□ -1.92
CENPAP49450 RNU1-45P-201ENST00000517191 141 ntBASIC3.04□□□□□ -1.92
CENPAP49450 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.04□□□□□ -1.92
CENPAP49450 AC090115.3-201ENST00000553218 849 ntBASIC3.04□□□□□ -1.92
CENPAP49450 MIR4782-201ENST00000577987 79 ntBASIC3.04□□□□□ -1.92
CENPAP49450 MIR3941-201ENST00000582572 103 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.04□□□□□ -1.92
CENPAP49450 BNIP3P25-201ENST00000596023 559 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AC007938.3-201ENST00000604965 623 ntBASIC3.04□□□□□ -1.92
CENPAP49450 CTHRC1P1-201ENST00000605383 469 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AC002044.1-201ENST00000606707 158 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AL121757.2-201ENST00000611223 313 ntBASIC3.04□□□□□ -1.92
CENPAP49450 AL121772.2-201ENST00000614331 297 ntBASIC3.04□□□□□ -1.92
CENPAP49450 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.04□□□□□ -1.92
CENPAP49450 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.04□□□□□ -1.92
CENPAP49450 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.04□□□□□ -1.92
CENPAP49450 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CENPAP49450 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CENPAP49450 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
CENPAP49450 ZNF519P1-201ENST00000449011 1626 ntBASIC3.04□□□□□ -1.92
CENPAP49450 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CENPAP49450 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CENPAP49450 RNU6-1252P-201ENST00000363054 104 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RNU1-73P-201ENST00000383971 164 ntBASIC3.03□□□□□ -1.92
CENPAP49450 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RNU2-25P-201ENST00000411041 191 ntBASIC3.03□□□□□ -1.92
CENPAP49450 USP9YP20-201ENST00000419224 558 ntBASIC3.03□□□□□ -1.92
CENPAP49450 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 AC092798.1-201ENST00000458542 409 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
CENPAP49450 SEM1P1-201ENST00000506694 209 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.03□□□□□ -1.92
CENPAP49450 AC079140.5-201ENST00000507882 310 ntBASIC3.03□□□□□ -1.92
CENPAP49450 FAM206BP-201ENST00000510179 541 ntBASIC3.03□□□□□ -1.92
CENPAP49450 FCF1P8-201ENST00000510322 597 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RNU4-49P-201ENST00000516080 140 ntBASIC3.03□□□□□ -1.92
CENPAP49450 SNORA14.1-201ENST00000516113 141 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RNU1-95P-201ENST00000516357 160 ntBASIC3.03□□□□□ -1.92
CENPAP49450 MIR892C-201ENST00000516410 77 ntBASIC3.03□□□□□ -1.92
CENPAP49450 RNU1-128P-201ENST00000516704 160 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CENPAP49450 MTCO3P23-201ENST00000561363 289 ntBASIC3.03□□□□□ -1.92
CENPAP49450 UBE2V2P2-201ENST00000587677 504 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AL162713.1-201ENST00000604480 262 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AC245389.1-201ENST00000605141 529 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AL357078.3-201ENST00000607528 618 ntBASIC3.03□□□□□ -1.92
CENPAP49450 AL355073.2-201ENST00000612106 557 ntBASIC3.03□□□□□ -1.92
CENPAP49450 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.03□□□□□ -1.92
CENPAP49450 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.03□□□□□ -1.92
CENPAP49450 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CENPAP49450 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CENPAP49450 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CENPAP49450 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CENPAP49450 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.02□□□□□ -1.93
CENPAP49450 RNA5SP197-201ENST00000363357 119 ntBASIC3.02□□□□□ -1.93
CENPAP49450 Y_RNA.167-201ENST00000363735 109 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU6-266P-201ENST00000364225 107 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU6-198P-201ENST00000384258 104 ntBASIC3.02□□□□□ -1.93
CENPAP49450 MIR23B-201ENST00000384832 97 ntBASIC3.02□□□□□ -1.93
CENPAP49450 MIR554-201ENST00000384874 96 ntBASIC3.02□□□□□ -1.93
CENPAP49450 MIR10A-201ENST00000385043 110 ntBASIC3.02□□□□□ -1.93
CENPAP49450 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.02□□□□□ -1.93
CENPAP49450 RNA5SP44-201ENST00000410446 133 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU6-1148P-201ENST00000410992 104 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU6-607P-201ENST00000411283 108 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AL592148.1-201ENST00000413568 445 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RPL26P27-201ENST00000414397 437 ntBASIC3.02□□□□□ -1.93
CENPAP49450 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
CENPAP49450 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.02□□□□□ -1.93
CENPAP49450 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.02□□□□□ -1.93
CENPAP49450 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.02□□□□□ -1.93
CENPAP49450 PGBD4P6-201ENST00000421501 610 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.02□□□□□ -1.93
CENPAP49450 AL627311.1-201ENST00000431514 115 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RPS29P20-201ENST00000489592 171 ntBASIC3.02□□□□□ -1.93
CENPAP49450 HMGN1P12-201ENST00000499125 195 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU1-86P-201ENST00000516108 154 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RNU1-107P-201ENST00000516617 154 ntBASIC3.02□□□□□ -1.93
CENPAP49450 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
CENPAP49450 RN7SKP256-201ENST00000517201 314 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AC023632.4-201ENST00000517783 191 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AC090136.1-201ENST00000520009 240 ntBASIC3.02□□□□□ -1.93
CENPAP49450 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.02□□□□□ -1.93
CENPAP49450 CYCSP27-201ENST00000527643 293 ntBASIC3.02□□□□□ -1.93
CENPAP49450 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.02□□□□□ -1.93
CENPAP49450 AC034105.4-201ENST00000568304 277 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms