Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 AL391646.1-201ENST00000603860 190 ntBASIC2.73□□□□□ -1.97
LHX1P48742 AL138889.2-201ENST00000603883 242 ntBASIC2.73□□□□□ -1.97
LHX1P48742 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.73□□□□□ -1.97
LHX1P48742 OR5AK4P-201ENST00000635912 903 ntBASIC2.73□□□□□ -1.97
LHX1P48742 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
LHX1P48742 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
LHX1P48742 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LHX1P48742 AC092435.3-201ENST00000565538 3654 ntBASIC2.72□□□□□ -1.97
LHX1P48742 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
LHX1P48742 RNU6-1029P-201ENST00000384109 107 ntBASIC2.72□□□□□ -1.97
LHX1P48742 Y_RNA.517-201ENST00000384551 106 ntBASIC2.72□□□□□ -1.97
LHX1P48742 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LHX1P48742 SNORA40C-201ENST00000391285 128 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AL356057.2-201ENST00000403318 432 ntBASIC2.72□□□□□ -1.97
LHX1P48742 OR6C66P-201ENST00000414917 930 ntBASIC2.72□□□□□ -1.97
LHX1P48742 ATG3P1-201ENST00000419507 911 ntBASIC2.72□□□□□ -1.97
LHX1P48742 MTCO2P19-201ENST00000427513 598 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AL078601.1-201ENST00000444542 271 ntBASIC2.72□□□□□ -1.97
LHX1P48742 HMGN2P10-201ENST00000448085 265 ntBASIC2.72□□□□□ -1.97
LHX1P48742 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.72□□□□□ -1.97
LHX1P48742 OR5BN1P-201ENST00000532955 829 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AC135279.1-201ENST00000543493 504 ntBASIC2.72□□□□□ -1.97
LHX1P48742 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LHX1P48742 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 AC234778.2-201ENST00000566241 354 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AL136363.2-201ENST00000604173 851 ntBASIC2.72□□□□□ -1.97
LHX1P48742 U4.3-201ENST00000621047 82 ntBASIC2.72□□□□□ -1.97
LHX1P48742 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.72□□□□□ -1.97
LHX1P48742 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.72□□□□□ -1.97
LHX1P48742 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
LHX1P48742 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
LHX1P48742 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LHX1P48742 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.71□□□□□ -1.98
LHX1P48742 U3.12-201ENST00000364498 214 ntBASIC2.71□□□□□ -1.98
LHX1P48742 RNU6-750P-201ENST00000390946 107 ntBASIC2.71□□□□□ -1.98
LHX1P48742 RNU6-550P-201ENST00000391057 101 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AL031779.1-201ENST00000415663 330 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC096649.2-201ENST00000416186 393 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.71□□□□□ -1.98
LHX1P48742 AL358075.3-201ENST00000426289 226 ntBASIC2.71□□□□□ -1.98
LHX1P48742 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.71□□□□□ -1.98
LHX1P48742 AL589823.1-201ENST00000429577 183 ntBASIC2.71□□□□□ -1.98
LHX1P48742 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.71□□□□□ -1.98
LHX1P48742 AL596276.1-201ENST00000434465 418 ntBASIC2.71□□□□□ -1.98
LHX1P48742 MTND1P18-201ENST00000448191 573 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.71□□□□□ -1.98
LHX1P48742 TRBV1-201ENST00000476502 284 ntBASIC2.71□□□□□ -1.98
LHX1P48742 RN7SL297P-201ENST00000483161 293 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC022493.1-201ENST00000492984 337 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC107401.1-201ENST00000503426 685 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.71□□□□□ -1.98
LHX1P48742 RN7SKP24-201ENST00000515888 284 ntBASIC2.71□□□□□ -1.98
LHX1P48742 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.71□□□□□ -1.98
LHX1P48742 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.71□□□□□ -1.98
LHX1P48742 AC021739.1-201ENST00000559631 174 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.71□□□□□ -1.98
LHX1P48742 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
LHX1P48742 RPL23AP78-201ENST00000599928 470 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC008945.2-201ENST00000606056 604 ntBASIC2.71□□□□□ -1.98
LHX1P48742 uc_338.11-201ENST00000619132 160 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AL158209.2-201ENST00000619266 216 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC073534.2-201ENST00000620377 381 ntBASIC2.71□□□□□ -1.98
LHX1P48742 AC005609.4-201ENST00000625071 447 ntBASIC2.71□□□□□ -1.98
LHX1P48742 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
LHX1P48742 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
LHX1P48742 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LHX1P48742 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
LHX1P48742 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.7□□□□□ -1.98
LHX1P48742 MIR449A-201ENST00000362113 91 ntBASIC2.7□□□□□ -1.98
LHX1P48742 SNORA75B-201ENST00000384053 137 ntBASIC2.7□□□□□ -1.98
LHX1P48742 RNU6-166P-201ENST00000384371 107 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 EEF1A1P40-201ENST00000412883 573 ntBASIC2.7□□□□□ -1.98
LHX1P48742 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 RPL7P37-201ENST00000425095 738 ntBASIC2.7□□□□□ -1.98
LHX1P48742 RPL39P40-201ENST00000445481 146 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
LHX1P48742 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.7□□□□□ -1.98
LHX1P48742 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 AC098799.2-201ENST00000509466 868 ntBASIC2.7□□□□□ -1.98
LHX1P48742 MRPS36P2-201ENST00000512569 299 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC112206.3-201ENST00000514578 389 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC006199.1-201ENST00000548728 219 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC245505.1-201ENST00000556398 224 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.7□□□□□ -1.98
LHX1P48742 MIR4703-201ENST00000577728 79 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 AC020895.1-201ENST00000595362 272 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC078795.2-201ENST00000602835 1252 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms