Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 ANKRD26P4-201ENST00000455755 950 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 AC087343.1-201ENST00000477341 475 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 RPL7P18-201ENST00000478965 734 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 RNU6-276P-201ENST00000516114 96 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 SNORD19.2-201ENST00000516978 73 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.56□□□□□ -2.16
COL18A1P39060 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.56□□□□□ -2.16
COL18A1P39060 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.56□□□□□ -2.16
COL18A1P39060 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.56□□□□□ -2.16
COL18A1P39060 PCMTD1P7-201ENST00000634506 357 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 AC106858.1-201ENST00000637497 429 ntBASIC1.56□□□□□ -2.16
COL18A1P39060 RNU6-289P-201ENST00000364093 107 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RNU6-413P-201ENST00000384115 107 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RNU6-278P-201ENST00000390945 109 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RNU6-1000P-201ENST00000391066 106 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 MIR320C1-201ENST00000408566 88 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 USP9YP33-201ENST00000412220 421 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.55□□□□□ -2.16
COL18A1P39060 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.55□□□□□ -2.16
COL18A1P39060 USP9YP35-201ENST00000435696 412 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 COX7BP2-201ENST00000437976 242 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.55□□□□□ -2.16
COL18A1P39060 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.55□□□□□ -2.16
COL18A1P39060 MTCYBP35-201ENST00000503630 1137 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AC109445.1-201ENST00000512356 383 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 MTND5P13-201ENST00000513046 1079 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RNU6-927P-201ENST00000516199 100 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 RNY4P37-201ENST00000516225 96 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 MRPS36P5-201ENST00000551909 298 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 CYCSP2-201ENST00000558168 301 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.55□□□□□ -2.16
COL18A1P39060 MIR98-201ENST00000606724 119 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AC092574.1-201ENST00000609771 420 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 uc_338.14-201ENST00000613162 166 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 AL138955.1-201ENST00000622881 1040 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.55□□□□□ -2.16
COL18A1P39060 MTND5P30-201ENST00000452896 1731 ntBASIC1.55□□□□□ -2.16
COL18A1P39060 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
COL18A1P39060 RNU6-220P-201ENST00000390919 107 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 RNU2-49P-201ENST00000410666 184 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 ELOCP30-201ENST00000447108 299 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 ZNF886P-201ENST00000450781 723 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.54□□□□□ -2.16
COL18A1P39060 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.54□□□□□ -2.16
COL18A1P39060 AC023141.11-201ENST00000508864 202 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.54□□□□□ -2.16
COL18A1P39060 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL18A1P39060 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.54□□□□□ -2.16
COL18A1P39060 AL359212.1-201ENST00000556608 614 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.54□□□□□ -2.16
COL18A1P39060 AC090186.1-201ENST00000605991 572 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC107214.2-201ENST00000608204 634 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL133445.2-201ENST00000611191 527 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC006338.1-201ENST00000618453 749 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 U2.21-201ENST00000637295 81 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.54□□□□□ -2.16
COL18A1P39060 RNU6-778P-201ENST00000363269 103 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 RNU1-133P-201ENST00000364867 167 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 RNU2-32P-201ENST00000411193 191 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 RPL21P24-201ENST00000413752 448 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 HMGN1P33-201ENST00000432945 451 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 RPL37P6-201ENST00000460682 294 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC108729.1-201ENST00000487812 947 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.54□□□□□ -2.16
COL18A1P39060 AC098591.2-201ENST00000510152 315 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AP005902.1-201ENST00000521358 186 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC010186.2-204ENST00000537668 439 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC021739.1-201ENST00000559631 174 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL138976.2-201ENST00000563989 694 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC009712.1-201ENST00000564938 316 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.54□□□□□ -2.16
COL18A1P39060 AC078899.2-201ENST00000595282 212 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AL391813.1-201ENST00000603098 260 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC006270.3-201ENST00000605967 1036 ntBASIC1.54□□□□□ -2.16
COL18A1P39060 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.54□□□□□ -2.16
COL18A1P39060 RNU1-139P-201ENST00000391307 165 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 MIR1284-201ENST00000408337 120 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 CYCSP33-201ENST00000414485 327 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.53□□□□□ -2.16
COL18A1P39060 AL136380.1-201ENST00000447970 162 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.53□□□□□ -2.16
COL18A1P39060 RNU7-59P-201ENST00000459101 61 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 AC010631.1-201ENST00000474150 156 ntBASIC1.53□□□□□ -2.16
COL18A1P39060 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.53□□□□□ -2.16
COL18A1P39060 AC093012.1-202ENST00000549403 582 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms