Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL603755.1-201ENST00000619504 163 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 AC007494.3-201ENST00000624660 743 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 U6.99-201ENST00000637524 83 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.1□□□□□ -2.07
SHMT2P34897 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.09□□□□□ -2.07
SHMT2P34897 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.09□□□□□ -2.07
SHMT2P34897 RNU4-21P-201ENST00000362802 126 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 SNORA75B-201ENST00000384053 137 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RNU6-1072P-201ENST00000384703 107 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RNU6-443P-201ENST00000384780 107 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 MIR301A-201ENST00000385261 86 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 SNORA40C-201ENST00000391285 128 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RPL23AP32-201ENST00000395315 459 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 MRPL42P2-201ENST00000403169 426 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 Y_RNA.598-201ENST00000410480 95 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AL109913.1-201ENST00000421173 514 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 CYCSP46-201ENST00000423569 204 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.09□□□□□ -2.07
SHMT2P34897 AC092447.3-201ENST00000426027 686 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.09□□□□□ -2.07
SHMT2P34897 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.09□□□□□ -2.07
SHMT2P34897 USP9YP15-201ENST00000442391 422 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SHMT2P34897 AC092001.1-201ENST00000453012 261 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.09□□□□□ -2.07
SHMT2P34897 RN7SL429P-201ENST00000479090 223 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RN7SL489P-201ENST00000486185 223 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RN7SL327P-201ENST00000488659 223 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SHMT2P34897 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.09□□□□□ -2.07
SHMT2P34897 RNU6-572P-201ENST00000516724 80 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 SNORA31.19-201ENST00000517079 126 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.09□□□□□ -2.07
SHMT2P34897 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.09□□□□□ -2.07
SHMT2P34897 AL157871.3-201ENST00000557231 293 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 MIR3167-201ENST00000579623 85 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
SHMT2P34897 MIR15A-201ENST00000607334 83 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 RN7SL853P-201ENST00000617250 223 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC005858.4-201ENST00000623191 700 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 AC120349.3-201ENST00000624377 529 ntBASIC2.09□□□□□ -2.07
SHMT2P34897 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.08□□□□□ -2.08
SHMT2P34897 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHMT2P34897 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHMT2P34897 AP000568.1-201ENST00000282964 442 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AC073343.1-201ENST00000328239 651 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHMT2P34897 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHMT2P34897 Y_RNA.169-201ENST00000363745 96 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 MIR518D-201ENST00000385014 87 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 RNU6-220P-201ENST00000390919 107 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 RNU6-1025P-201ENST00000410629 104 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 MORF4L1P6-201ENST00000418771 268 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 ELOCP4-201ENST00000420090 333 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 AC137499.1-201ENST00000427602 88 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.08□□□□□ -2.08
SHMT2P34897 MICF-203ENST00000432679 129 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 RPS24P1-201ENST00000438550 371 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 MTND6P13-201ENST00000443510 523 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.08□□□□□ -2.08
SHMT2P34897 RPL9P6-201ENST00000492764 598 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 RNU6-1220P-201ENST00000517126 108 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SHMT2P34897 AC022616.3-201ENST00000523940 148 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 DUXAP5-201ENST00000529668 529 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.08□□□□□ -2.08
SHMT2P34897 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 MIR4782-201ENST00000577987 79 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHMT2P34897 MIR4648-201ENST00000580107 72 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.08□□□□□ -2.08
SHMT2P34897 AP000770.2-201ENST00000623694 100 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 AL603839.4-201ENST00000624658 1005 ntBASIC2.08□□□□□ -2.08
SHMT2P34897 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.07□□□□□ -2.08
SHMT2P34897 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHMT2P34897 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SHMT2P34897 Y_RNA.22-201ENST00000362492 102 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 MIR558-201ENST00000384920 94 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 RPS3AP36-201ENST00000398190 775 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AL355497.1-201ENST00000406262 551 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 USP9YP6-201ENST00000413550 854 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 PTGES3P4-201ENST00000426243 356 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.07□□□□□ -2.08
SHMT2P34897 RPL23AP30-201ENST00000432419 501 ntBASIC2.07□□□□□ -2.08
SHMT2P34897 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms