Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CPS1P31327 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.33□□□□□ -2.36
CPS1P31327 RNA5SP112-201ENST00000515937 99 ntBASIC0.33□□□□□ -2.36
CPS1P31327 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.33□□□□□ -2.36
CPS1P31327 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.33□□□□□ -2.36
CPS1P31327 AC099842.1-201ENST00000619919 596 ntBASIC0.33□□□□□ -2.36
CPS1P31327 MIR506-201ENST00000384998 124 ntBASIC0.33□□□□□ -2.36
CPS1P31327 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CPS1P31327 AC069282.1-201ENST00000411911 526 ntBASIC0.33□□□□□ -2.36
CPS1P31327 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.33□□□□□ -2.36
CPS1P31327 SNORD116-28-201ENST00000516123 91 ntBASIC0.33□□□□□ -2.36
CPS1P31327 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.33□□□□□ -2.36
CPS1P31327 AP003034.1-201ENST00000534621 422 ntBASIC0.33□□□□□ -2.36
CPS1P31327 MED28P6-201ENST00000558776 231 ntBASIC0.33□□□□□ -2.36
CPS1P31327 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CPS1P31327 RNU1-58P-201ENST00000362413 163 ntBASIC0.32□□□□□ -2.36
CPS1P31327 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.32□□□□□ -2.36
CPS1P31327 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.32□□□□□ -2.36
CPS1P31327 AL034418.1-201ENST00000448675 860 ntBASIC0.32□□□□□ -2.36
CPS1P31327 AC112492.4-201ENST00000456549 352 ntBASIC0.32□□□□□ -2.36
CPS1P31327 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.32□□□□□ -2.36
CPS1P31327 AC118282.2-201ENST00000508739 374 ntBASIC0.32□□□□□ -2.36
CPS1P31327 AL359212.1-201ENST00000556608 614 ntBASIC0.32□□□□□ -2.36
CPS1P31327 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CPS1P31327 RNU6-968P-201ENST00000384076 107 ntBASIC0.31□□□□□ -2.36
CPS1P31327 MIR218-1-201ENST00000384999 110 ntBASIC0.31□□□□□ -2.36
CPS1P31327 MIR518D-201ENST00000385014 87 ntBASIC0.31□□□□□ -2.36
CPS1P31327 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.31□□□□□ -2.36
CPS1P31327 AC092573.2-201ENST00000434546 243 ntBASIC0.31□□□□□ -2.36
CPS1P31327 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.31□□□□□ -2.36
CPS1P31327 AC067940.1-201ENST00000458411 300 ntBASIC0.31□□□□□ -2.36
CPS1P31327 AC087477.1-201ENST00000465747 340 ntBASIC0.31□□□□□ -2.36
CPS1P31327 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.31□□□□□ -2.36
CPS1P31327 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.31□□□□□ -2.36
CPS1P31327 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.31□□□□□ -2.36
CPS1P31327 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.31□□□□□ -2.36
CPS1P31327 AL356432.3-201ENST00000568952 465 ntBASIC0.31□□□□□ -2.36
CPS1P31327 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.31□□□□□ -2.36
CPS1P31327 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.31□□□□□ -2.36
CPS1P31327 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.31□□□□□ -2.36
CPS1P31327 BNIP3P26-201ENST00000600827 554 ntBASIC0.31□□□□□ -2.36
CPS1P31327 AP003973.1-201ENST00000604639 691 ntBASIC0.31□□□□□ -2.36
CPS1P31327 AL021879.1-201ENST00000611756 288 ntBASIC0.31□□□□□ -2.36
CPS1P31327 RNU6-1249P-201ENST00000363237 111 ntBASIC0.3□□□□□ -2.36
CPS1P31327 RNU6-271P-201ENST00000363858 105 ntBASIC0.3□□□□□ -2.36
CPS1P31327 RNA5SP368-201ENST00000364298 116 ntBASIC0.3□□□□□ -2.36
CPS1P31327 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.3□□□□□ -2.36
CPS1P31327 CYCTP-201ENST00000504253 315 ntBASIC0.3□□□□□ -2.36
CPS1P31327 SNORA70.16-201ENST00000516390 95 ntBASIC0.3□□□□□ -2.36
CPS1P31327 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.3□□□□□ -2.36
CPS1P31327 AC068057.2-201ENST00000624047 895 ntBASIC0.3□□□□□ -2.36
CPS1P31327 Y_RNA.142-201ENST00000363491 102 ntBASIC0.29□□□□□ -2.36
CPS1P31327 RNU6-923P-201ENST00000364753 107 ntBASIC0.29□□□□□ -2.36
CPS1P31327 Y_RNA.324-201ENST00000365165 102 ntBASIC0.29□□□□□ -2.36
CPS1P31327 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.29□□□□□ -2.36
CPS1P31327 RNU6-1197P-201ENST00000391183 107 ntBASIC0.29□□□□□ -2.36
CPS1P31327 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.29□□□□□ -2.36
CPS1P31327 RNU2-36P-201ENST00000410361 191 ntBASIC0.29□□□□□ -2.36
CPS1P31327 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.29□□□□□ -2.36
CPS1P31327 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.29□□□□□ -2.36
CPS1P31327 snoU13.9-201ENST00000458927 103 ntBASIC0.29□□□□□ -2.36
CPS1P31327 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.29□□□□□ -2.36
CPS1P31327 MTCO2P2-201ENST00000591258 225 ntBASIC0.29□□□□□ -2.36
CPS1P31327 AC069294.1-201ENST00000608397 350 ntBASIC0.29□□□□□ -2.36
CPS1P31327 AL391597.1-201ENST00000618707 694 ntBASIC0.29□□□□□ -2.36
CPS1P31327 ZNF680P1-201ENST00000436625 1469 ntBASIC0.29□□□□□ -2.36
CPS1P31327 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.28□□□□□ -2.36
CPS1P31327 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.36
CPS1P31327 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.28□□□□□ -2.36
CPS1P31327 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.28□□□□□ -2.36
CPS1P31327 RNU6-420P-201ENST00000458780 107 ntBASIC0.28□□□□□ -2.36
CPS1P31327 AC114982.1-201ENST00000469402 321 ntBASIC0.28□□□□□ -2.36
CPS1P31327 AP001025.1-201ENST00000486139 332 ntBASIC0.28□□□□□ -2.36
CPS1P31327 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.28□□□□□ -2.36
CPS1P31327 uc_338.14-201ENST00000613162 166 ntBASIC0.28□□□□□ -2.36
CPS1P31327 MIR8074-201ENST00000615081 81 ntBASIC0.28□□□□□ -2.36
CPS1P31327 AC005832.2-201ENST00000538921 1430 ntBASIC0.28□□□□□ -2.37
CPS1P31327 AC006548.1-201ENST00000427470 102 ntBASIC0.28□□□□□ -2.37
CPS1P31327 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.28□□□□□ -2.37
CPS1P31327 RSL24D1P8-201ENST00000434442 492 ntBASIC0.28□□□□□ -2.37
CPS1P31327 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.28□□□□□ -2.37
CPS1P31327 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.28□□□□□ -2.37
CPS1P31327 RPL31P3-201ENST00000458430 332 ntBASIC0.28□□□□□ -2.37
CPS1P31327 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.28□□□□□ -2.37
CPS1P31327 BNIP3P16-201ENST00000589779 534 ntBASIC0.28□□□□□ -2.37
CPS1P31327 AC093838.1-201ENST00000613014 469 ntBASIC0.28□□□□□ -2.37
CPS1P31327 CR381572.1-201ENST00000625098 102 ntBASIC0.28□□□□□ -2.37
CPS1P31327 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CPS1P31327 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CPS1P31327 MT-TC-201ENST00000387405 66 ntBASIC0.27□□□□□ -2.37
CPS1P31327 ZNF863P-201ENST00000426746 417 ntBASIC0.27□□□□□ -2.37
CPS1P31327 PGBD4P5-201ENST00000445958 426 ntBASIC0.27□□□□□ -2.37
CPS1P31327 AL353691.1-201ENST00000451332 387 ntBASIC0.27□□□□□ -2.37
CPS1P31327 AC008121.1-201ENST00000603244 268 ntBASIC0.27□□□□□ -2.37
CPS1P31327 AC008443.7-201ENST00000622195 246 ntBASIC0.27□□□□□ -2.37
CPS1P31327 RNU6-1083P-201ENST00000384022 107 ntBASIC0.26□□□□□ -2.37
CPS1P31327 MIR608-201ENST00000384820 100 ntBASIC0.26□□□□□ -2.37
CPS1P31327 OFD1P18Y-201ENST00000420889 959 ntBASIC0.26□□□□□ -2.37
CPS1P31327 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.26□□□□□ -2.37
CPS1P31327 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms