Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU6-236P-201ENST00000363886 106 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 RNU6-359P-201ENST00000365466 108 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL109755.1-201ENST00000401791 649 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL512604.1-201ENST00000404812 257 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.2□□□□□ -2.22
COL4A5P29400 SNRPEP9-201ENST00000436794 238 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL121601.2-201ENST00000438019 707 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 AL158053.1-201ENST00000441503 453 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A5P29400 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A5P29400 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A5P29400 MIR892C-201ENST00000516410 77 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A5P29400 AC026616.1-201ENST00000523157 525 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC004805.2-201ENST00000605382 482 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL390208.1-201ENST00000605885 644 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC009237.15-201ENST00000610252 501 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC003001.2-201ENST00000616294 831 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AC093875.1-201ENST00000623688 504 ntBASIC1.2□□□□□ -2.22
COL4A5P29400 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.2□□□□□ -2.22
COL4A5P29400 AL079343.1-201ENST00000572358 1771 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL4A5P29400 RNU6-354P-201ENST00000383862 107 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 RNU6-610P-201ENST00000384264 107 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 RNU6-19P-201ENST00000384718 107 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
COL4A5P29400 PTGES3P2-201ENST00000407942 482 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AL109913.1-201ENST00000421173 514 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 RPL31P63-201ENST00000422565 375 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A5P29400 SEPT14P24-201ENST00000447236 180 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 ARPC3P5-201ENST00000448802 534 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.19□□□□□ -2.22
COL4A5P29400 AC005410.1-202ENST00000460347 485 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 RNU2-19P-201ENST00000517288 84 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A5P29400 AC104417.1-201ENST00000523974 751 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AP004247.1-201ENST00000531556 1289 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A5P29400 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A5P29400 AC021739.1-201ENST00000559631 174 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.19□□□□□ -2.22
COL4A5P29400 MIR4698-201ENST00000577795 80 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AC005261.5-201ENST00000596280 355 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 BBIP1P1-201ENST00000602999 279 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AL391813.1-201ENST00000603098 260 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
COL4A5P29400 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.19□□□□□ -2.22
COL4A5P29400 CDR1-202ENST00000625883 1485 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 RNA5SP125-201ENST00000364843 120 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL4A5P29400 CIR1P3-201ENST00000405137 479 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 MIR1302-8-201ENST00000408342 128 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 RN7SKP200-201ENST00000410564 320 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 BTF3P8-201ENST00000414577 526 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A5P29400 ELOCP14-201ENST00000428070 331 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 MTCO1P3-201ENST00000429327 192 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 USP9YP22-201ENST00000438971 294 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 ELOCP7-201ENST00000439968 331 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.18□□□□□ -2.22
COL4A5P29400 TMEM251P1-201ENST00000503717 318 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC114981.1-201ENST00000503897 678 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 RNU6-362P-201ENST00000516736 90 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.18□□□□□ -2.22
COL4A5P29400 HSBP1P1-201ENST00000555205 166 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC122134.1-202ENST00000569111 1201 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A5P29400 AC069304.2-201ENST00000605154 435 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC092953.2-201ENST00000608000 699 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC009090.3-201ENST00000616553 565 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC253576.2-201ENST00000618815 580 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 AC120349.2-201ENST00000625002 298 ntBASIC1.18□□□□□ -2.22
COL4A5P29400 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
COL4A5P29400 RNU5E-1-201ENST00000362477 120 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.17□□□□□ -2.22
COL4A5P29400 MIR218-1-201ENST00000384999 110 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL356432.1-201ENST00000405809 419 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL139421.1-201ENST00000423010 169 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.17□□□□□ -2.22
COL4A5P29400 MTND2P20-201ENST00000440805 661 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL161788.1-201ENST00000441805 169 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL360221.1-201ENST00000445989 335 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL500527.1-201ENST00000448532 255 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.17□□□□□ -2.22
COL4A5P29400 RPL37P6-201ENST00000460682 294 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 AL121769.1-201ENST00000469473 401 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 RPL36AP48-201ENST00000485521 314 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 MRPS33P3-201ENST00000513456 322 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.17□□□□□ -2.22
COL4A5P29400 AC093677.1-201ENST00000514414 678 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 OR8K2P-201ENST00000524645 927 ntBASIC1.17□□□□□ -2.22
COL4A5P29400 ZNF971P-201ENST00000562068 1249 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms