Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MTCO3P9-201ENST00000506989 781 ntBASIC2.57□□□□□ -2
SHC1P29353 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.57□□□□□ -2
SHC1P29353 AC104806.1-201ENST00000508720 308 ntBASIC2.57□□□□□ -2
SHC1P29353 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
SHC1P29353 AC108078.2-201ENST00000510750 236 ntBASIC2.57□□□□□ -2
SHC1P29353 TTC39CP1-201ENST00000512513 755 ntBASIC2.57□□□□□ -2
SHC1P29353 RNU4-29P-201ENST00000515943 174 ntBASIC2.57□□□□□ -2
SHC1P29353 RNU6-1038P-201ENST00000516516 104 ntBASIC2.57□□□□□ -2
SHC1P29353 RNA5SP503-201ENST00000517047 117 ntBASIC2.57□□□□□ -2
SHC1P29353 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.57□□□□□ -2
SHC1P29353 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.57□□□□□ -2
SHC1P29353 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.57□□□□□ -2
SHC1P29353 AC078814.3-201ENST00000553036 491 ntBASIC2.57□□□□□ -2
SHC1P29353 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.57□□□□□ -2
SHC1P29353 EIF4BP1-201ENST00000554881 351 ntBASIC2.57□□□□□ -2
SHC1P29353 RPS3AP23-202ENST00000574601 686 ntBASIC2.57□□□□□ -2
SHC1P29353 MIR5583-1-201ENST00000580941 59 ntBASIC2.57□□□□□ -2
SHC1P29353 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.57□□□□□ -2
SHC1P29353 FRG1KP-201ENST00000623592 341 ntBASIC2.57□□□□□ -2
SHC1P29353 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SHC1P29353 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
SHC1P29353 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SHC1P29353 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SHC1P29353 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.57□□□□□ -2
SHC1P29353 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.57□□□□□ -2
SHC1P29353 AC096644.4-201ENST00000563417 2912 ntBASIC2.56□□□□□ -2
SHC1P29353 Y_RNA.231-201ENST00000364358 102 ntBASIC2.56□□□□□ -2
SHC1P29353 RNU4-66P-201ENST00000365199 138 ntBASIC2.56□□□□□ -2
SHC1P29353 SNORA32.2-201ENST00000384049 122 ntBASIC2.56□□□□□ -2
SHC1P29353 SNORA36C-201ENST00000384289 132 ntBASIC2.56□□□□□ -2
SHC1P29353 Y_RNA.509-201ENST00000384506 99 ntBASIC2.56□□□□□ -2
SHC1P29353 SNORD37.1-201ENST00000390968 65 ntBASIC2.56□□□□□ -2
SHC1P29353 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
SHC1P29353 NDUFS5P1-201ENST00000405668 289 ntBASIC2.56□□□□□ -2
SHC1P29353 RPL27AP8-201ENST00000424277 446 ntBASIC2.56□□□□□ -2
SHC1P29353 MTND4P28-201ENST00000426217 387 ntBASIC2.56□□□□□ -2
SHC1P29353 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.56□□□□□ -2
SHC1P29353 ERLEC1P1-201ENST00000433806 578 ntBASIC2.56□□□□□ -2
SHC1P29353 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.56□□□□□ -2
SHC1P29353 AC024082.2-201ENST00000434771 238 ntBASIC2.56□□□□□ -2
SHC1P29353 RPL36AP6-201ENST00000435770 321 ntBASIC2.56□□□□□ -2
SHC1P29353 TAAR7P-201ENST00000436141 242 ntBASIC2.56□□□□□ -2
SHC1P29353 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
SHC1P29353 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 AC117522.3-201ENST00000507974 584 ntBASIC2.56□□□□□ -2
SHC1P29353 HIGD1AP13-201ENST00000509878 289 ntBASIC2.56□□□□□ -2
SHC1P29353 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.56□□□□□ -2
SHC1P29353 MTND3P22-201ENST00000510932 243 ntBASIC2.56□□□□□ -2
SHC1P29353 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.56□□□□□ -2
SHC1P29353 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 BTF3P12-201ENST00000519620 469 ntBASIC2.56□□□□□ -2
SHC1P29353 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.56□□□□□ -2
SHC1P29353 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.56□□□□□ -2
SHC1P29353 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 AC243972.3-201ENST00000539655 198 ntBASIC2.56□□□□□ -2
SHC1P29353 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 AC093012.1-202ENST00000549403 582 ntBASIC2.56□□□□□ -2
SHC1P29353 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
SHC1P29353 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.56□□□□□ -2
SHC1P29353 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.56□□□□□ -2
SHC1P29353 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 AC106782.4-201ENST00000568264 210 ntBASIC2.56□□□□□ -2
SHC1P29353 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.56□□□□□ -2
SHC1P29353 RPL23AP84-201ENST00000571193 464 ntBASIC2.56□□□□□ -2
SHC1P29353 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.56□□□□□ -2
SHC1P29353 AC024153.1-201ENST00000603103 365 ntBASIC2.56□□□□□ -2
SHC1P29353 AC021646.1-201ENST00000605469 484 ntBASIC2.56□□□□□ -2
SHC1P29353 AC007619.2-201ENST00000605743 379 ntBASIC2.56□□□□□ -2
SHC1P29353 AP002826.1-201ENST00000608835 315 ntBASIC2.56□□□□□ -2
SHC1P29353 AL138880.2-201ENST00000616214 239 ntBASIC2.56□□□□□ -2
SHC1P29353 AC009248.2-201ENST00000619826 254 ntBASIC2.56□□□□□ -2
SHC1P29353 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.56□□□□□ -2
SHC1P29353 U6.114-201ENST00000636407 96 ntBASIC2.56□□□□□ -2
SHC1P29353 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
SHC1P29353 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SHC1P29353 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHC1P29353 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.55□□□□□ -2
SHC1P29353 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHC1P29353 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.55□□□□□ -2
SHC1P29353 RNU4-73P-201ENST00000363164 141 ntBASIC2.55□□□□□ -2
SHC1P29353 Y_RNA.167-201ENST00000363735 109 ntBASIC2.55□□□□□ -2
SHC1P29353 RNU6-522P-201ENST00000364497 107 ntBASIC2.55□□□□□ -2
SHC1P29353 Y_RNA.356-201ENST00000365475 113 ntBASIC2.55□□□□□ -2
SHC1P29353 AL122016.1-201ENST00000403365 367 ntBASIC2.55□□□□□ -2
SHC1P29353 AL139397.2-201ENST00000404529 772 ntBASIC2.55□□□□□ -2
SHC1P29353 AL356432.1-201ENST00000405809 419 ntBASIC2.55□□□□□ -2
SHC1P29353 AL606923.1-201ENST00000406616 190 ntBASIC2.55□□□□□ -2
SHC1P29353 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.55□□□□□ -2
SHC1P29353 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.55□□□□□ -2
SHC1P29353 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
SHC1P29353 TMEM167AP1-201ENST00000423409 219 ntBASIC2.55□□□□□ -2
SHC1P29353 AC093019.1-201ENST00000443135 252 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms