Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU1-68P-201ENST00000615382 146 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 PISRT1.1-201ENST00000616930 107 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AL162373.1-201ENST00000620433 407 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 U1.39-201ENST00000621562 146 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 AL669831.3-213ENST00000636676 183 ntBASIC3.65□□□□□ -1.83
POLR2AP24928 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR2AP24928 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR2AP24928 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR2AP24928 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
POLR2AP24928 SNORD15B-201ENST00000384714 146 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 RN7SKP158-201ENST00000410453 326 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR2AP24928 ARL5AP4-201ENST00000430731 512 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 AL136097.1-201ENST00000456945 913 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 RPL22P13-201ENST00000493291 347 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 Y_RNA.670-201ENST00000516255 105 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR2AP24928 AC006270.2-201ENST00000578523 652 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 AC007938.3-201ENST00000604965 623 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 FAM157A-202ENST00000615155 405 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 SNHG22-203ENST00000617833 660 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR2AP24928 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR2AP24928 HSPA8P4-201ENST00000511877 1920 ntBASIC3.64□□□□□ -1.83
POLR2AP24928 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR2AP24928 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR2AP24928 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR2AP24928 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
POLR2AP24928 Y_RNA.151-201ENST00000363566 112 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RNU6-784P-201ENST00000384330 106 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 Y_RNA.473-201ENST00000384333 102 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 Y_RNA.485-201ENST00000384395 102 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RNU6-393P-201ENST00000384475 107 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 MIR517A-201ENST00000385001 87 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RNU2-52P-201ENST00000410680 190 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RPL31P12-201ENST00000422587 358 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC022018.1-201ENST00000430685 241 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 Y_RNA.638-201ENST00000459374 113 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC015911.1-201ENST00000495111 156 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC026801.1-201ENST00000497178 464 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RPL23AP55-201ENST00000498163 452 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RNA5SP384-201ENST00000516615 116 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RNA5SP503-201ENST00000517047 117 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 H3F3AP1-201ENST00000559984 334 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 MTCO3P23-201ENST00000561363 289 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR2AP24928 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR2AP24928 MIR5047-201ENST00000579212 100 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 MIR4503-201ENST00000582187 83 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC008521.1-201ENST00000587471 187 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC125232.2-201ENST00000592457 143 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR2AP24928 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
POLR2AP24928 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR2AP24928 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
POLR2AP24928 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
POLR2AP24928 RNU6-472P-201ENST00000384299 107 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 PGBD4P6-201ENST00000421501 610 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RPS12P18-201ENST00000442381 270 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 SCARNA18-201ENST00000459004 134 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC006512.1-201ENST00000468816 291 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC087884.1-201ENST00000469738 328 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR2AP24928 AC107222.1-201ENST00000510899 637 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 MTCO3P44-201ENST00000510977 541 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR2AP24928 RNU6-64P-201ENST00000517119 105 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC009902.1-201ENST00000519351 183 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR2AP24928 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 RPL12P50-201ENST00000603116 116 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC006254.3-201ENST00000603353 884 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC025588.3-201ENST00000604182 274 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 AC091925.1-201ENST00000623204 462 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
POLR2AP24928 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
POLR2AP24928 DDX18P3-201ENST00000404856 2007 ntBASIC3.63□□□□□ -1.83
POLR2AP24928 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-702P-201ENST00000364982 107 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 Y_RNA.482-201ENST00000384377 111 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
POLR2AP24928 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 AC022447.4-201ENST00000504053 364 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-1332P-201ENST00000516666 104 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-388P-201ENST00000517012 105 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-389P-201ENST00000517048 105 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 AC110588.1-201ENST00000559699 137 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 SUB1P3-201ENST00000564581 315 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms