Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ERCC3P19447 SNORA60-201ENST00000362396 134 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.67□□□□□ -1.66
ERCC3P19447 BX276092.3-201ENST00000424182 230 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AL353997.1-201ENST00000432936 108 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 RPL21P23-201ENST00000446654 460 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AC114801.2-201ENST00000503825 781 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 RNU6-470P-201ENST00000515954 104 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 RNU6-976P-201ENST00000516086 111 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 SNORA43.2-201ENST00000516652 128 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 RNU6-612P-201ENST00000516909 102 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AP005902.1-201ENST00000521358 186 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 ELOCP31-201ENST00000540463 467 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AC091516.1-201ENST00000549191 703 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AL360157.1-201ENST00000565962 87 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 MTCO3P13-201ENST00000577757 781 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.67□□□□□ -1.66
ERCC3P19447 AC006504.6-201ENST00000590142 199 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.67□□□□□ -1.66
ERCC3P19447 SRGNP1-201ENST00000603392 451 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 XIST_intron.1-201ENST00000619444 68 ntBASIC4.67□□□□□ -1.66
ERCC3P19447 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
ERCC3P19447 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ERCC3P19447 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
ERCC3P19447 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.66□□□□□ -1.66
ERCC3P19447 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 FAM35DP-201ENST00000323387 2712 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 MIR208A-201ENST00000362287 71 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 RNU6-336P-201ENST00000364891 107 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 SNORD116-20-201ENST00000384529 92 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.66□□□□□ -1.66
ERCC3P19447 AC010099.1-201ENST00000455434 375 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 RPL23AP14-201ENST00000468281 468 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.66□□□□□ -1.66
ERCC3P19447 AC068781.1-201ENST00000488231 618 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 RNU6-988P-201ENST00000519081 107 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.66□□□□□ -1.66
ERCC3P19447 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.66□□□□□ -1.66
ERCC3P19447 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ERCC3P19447 PLCE1P1-201ENST00000622094 305 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.66□□□□□ -1.66
ERCC3P19447 MAPK10-253ENST00000641010 4072 ntBASIC4.66□□□□□ -1.66
ERCC3P19447 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ERCC3P19447 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.65□□□□□ -1.66
ERCC3P19447 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
ERCC3P19447 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.65□□□□□ -1.66
ERCC3P19447 Z82217.1-201ENST00000625157 8149 ntBASIC4.65□□□□□ -1.66
ERCC3P19447 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.65□□□□□ -1.66
ERCC3P19447 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ERCC3P19447 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.65□□□□□ -1.66
ERCC3P19447 RNU6-198P-201ENST00000384258 104 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 MIR518D-201ENST00000385014 87 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 RNU6-1245P-201ENST00000411130 106 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC3P19447 AL358472.1-201ENST00000431295 329 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
ERCC3P19447 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC3P19447 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.65□□□□□ -1.67
ERCC3P19447 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.65□□□□□ -1.67
ERCC3P19447 AC063950.1-201ENST00000552036 308 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 AC005476.1-201ENST00000554427 397 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 AC008739.3-201ENST00000603262 127 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.65□□□□□ -1.67
ERCC3P19447 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.65□□□□□ -1.67
ERCC3P19447 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
ERCC3P19447 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.65□□□□□ -1.67
ERCC3P19447 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ERCC3P19447 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.65□□□□□ -1.67
ERCC3P19447 AC002546.1-201ENST00000588041 2504 ntBASIC4.65□□□□□ -1.67
ERCC3P19447 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
ERCC3P19447 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC3P19447 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC3P19447 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC3P19447 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ERCC3P19447 SNORA73.2-201ENST00000364946 201 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 SNORA22B-201ENST00000383876 138 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 Y_RNA.395-201ENST00000383945 109 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 MIR449B-201ENST00000384995 97 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 SETP5-201ENST00000437270 562 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC3P19447 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC3P19447 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.64□□□□□ -1.67
ERCC3P19447 RPL29P14-201ENST00000495837 428 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 Y_RNA.711-201ENST00000516993 102 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 RNU6-699P-201ENST00000517081 110 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC3P19447 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC3P19447 AC025627.2-201ENST00000576220 160 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.64□□□□□ -1.67
ERCC3P19447 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.64□□□□□ -1.67
ERCC3P19447 MIR6134-201ENST00000617606 109 ntBASIC4.64□□□□□ -1.67
ERCC3P19447 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ERCC3P19447 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC3P19447 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC3P19447 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
ERCC3P19447 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms