Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC092634.6-201ENST00000418558 192 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 VN1R42P-201ENST00000424651 344 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 NANOGP2-201ENST00000435391 727 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 BUD31P2-201ENST00000449374 300 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGA1P17096 AC111193.1-201ENST00000504097 155 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGA1P17096 AC104057.1-201ENST00000515547 497 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 SNORD116-28-201ENST00000516123 91 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 RNU6-197P-201ENST00000516680 100 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
HMGA1P17096 DUXAP1-201ENST00000556632 463 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 CYP3A52P-201ENST00000563326 91 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGA1P17096 BNIP3P16-201ENST00000589779 534 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGA1P17096 AL121652.1-201ENST00000608851 448 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC095038.3-201ENST00000634439 195 ntBASIC0.33□□□□□ -2.36
HMGA1P17096 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGA1P17096 RNU6-222P-201ENST00000362438 107 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 MIR29C-201ENST00000385231 88 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
HMGA1P17096 TAAR7P-201ENST00000436141 242 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 AC097499.1-201ENST00000444277 208 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGA1P17096 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGA1P17096 AC087477.1-201ENST00000465747 340 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
HMGA1P17096 SNORA25.11-201ENST00000515935 105 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 POLR2KP1-201ENST00000553226 168 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 AC010900.2-201ENST00000604508 210 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 AC069304.2-201ENST00000605154 435 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 AC055876.5-201ENST00000605667 259 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 MIR5739-201ENST00000619803 80 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 MIR924-201ENST00000638017 53 ntBASIC0.32□□□□□ -2.36
HMGA1P17096 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.32□□□□□ -2.36
HMGA1P17096 Y_RNA.62-201ENST00000362840 99 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 RNU11-3P-201ENST00000391111 133 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AL160275.3-201ENST00000423876 471 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 CETN4P-201ENST00000432407 469 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 RAC1P7-201ENST00000445367 377 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AL592447.1-201ENST00000447592 540 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGA1P17096 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGA1P17096 SMURF2P1-201ENST00000514992 481 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.31□□□□□ -2.36
HMGA1P17096 AC008127.2-201ENST00000549925 1075 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGA1P17096 HMGN1P30-201ENST00000589286 268 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AC040896.1-201ENST00000613819 479 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 AC024581.2-201ENST00000619986 252 ntBASIC0.31□□□□□ -2.36
HMGA1P17096 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGA1P17096 SNORA25B-201ENST00000365507 128 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 MIR506-201ENST00000384998 124 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGA1P17096 FABP5P14-201ENST00000437273 393 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGA1P17096 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGA1P17096 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGA1P17096 MTND5P8-201ENST00000449817 1083 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 SNORA48.9-201ENST00000516419 162 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 RNA5SP121-201ENST00000516537 101 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGA1P17096 AC087897.1-201ENST00000550134 156 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGA1P17096 GAS5-AS1-201ENST00000602767 694 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AL137246.1-201ENST00000607072 977 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AC006213.4-201ENST00000616184 634 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 AC007490.1-201ENST00000624321 703 ntBASIC0.3□□□□□ -2.36
HMGA1P17096 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HMGA1P17096 SNORD33-201ENST00000362761 85 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 RNU6-670P-201ENST00000364312 104 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 MIR561-201ENST00000385216 97 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 ERHP2-201ENST00000402323 299 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AL049734.2-201ENST00000441066 616 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 MTCO1P44-201ENST00000441935 243 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AC023512.1-201ENST00000444513 499 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AC108729.1-201ENST00000487812 947 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 TRBVA-201ENST00000498804 316 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGA1P17096 AK3P2-201ENST00000507976 429 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGA1P17096 SNORA31.22-201ENST00000517204 135 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.29□□□□□ -2.36
HMGA1P17096 AC006518.2-201ENST00000542513 940 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGA1P17096 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGA1P17096 MIR3937-201ENST00000580135 106 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 MTCO2P2-201ENST00000591258 225 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 SNRPGP17-201ENST00000603780 214 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AP000654.2-201ENST00000605633 586 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AL022345.2-201ENST00000606307 135 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 MIR8087-201ENST00000612745 78 ntBASIC0.29□□□□□ -2.36
HMGA1P17096 AC073968.1-201ENST00000618594 637 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms