Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.05□□□□□ -1.92
PCNAP12004 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AC092747.3-201ENST00000603769 301 ntBASIC3.05□□□□□ -1.92
PCNAP12004 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.05□□□□□ -1.92
PCNAP12004 AC022336.2-201ENST00000568966 2538 ntBASIC3.05□□□□□ -1.92
PCNAP12004 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCNAP12004 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
PCNAP12004 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCNAP12004 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
PCNAP12004 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
PCNAP12004 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCNAP12004 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCNAP12004 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PCNAP12004 Y_RNA.167-201ENST00000363735 109 ntBASIC3.04□□□□□ -1.92
PCNAP12004 Y_RNA.373-201ENST00000365600 103 ntBASIC3.04□□□□□ -1.92
PCNAP12004 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCNAP12004 RNU1-73P-201ENST00000383971 164 ntBASIC3.04□□□□□ -1.92
PCNAP12004 RNU6-198P-201ENST00000384258 104 ntBASIC3.04□□□□□ -1.92
PCNAP12004 RNU6-166P-201ENST00000384371 107 ntBASIC3.04□□□□□ -1.92
PCNAP12004 MT-TL1-201ENST00000386347 75 ntBASIC3.04□□□□□ -1.92
PCNAP12004 RN7SKP27-201ENST00000410684 333 ntBASIC3.04□□□□□ -1.92
PCNAP12004 RNU6-1148P-201ENST00000410992 104 ntBASIC3.04□□□□□ -1.92
PCNAP12004 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.04□□□□□ -1.92
PCNAP12004 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.04□□□□□ -1.92
PCNAP12004 HMGN2P30-201ENST00000423237 256 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AL353729.1-201ENST00000425044 720 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.04□□□□□ -1.92
PCNAP12004 AC087884.1-201ENST00000469738 328 ntBASIC3.04□□□□□ -1.92
PCNAP12004 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.04□□□□□ -1.92
PCNAP12004 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.04□□□□□ -1.92
PCNAP12004 AC104136.1-201ENST00000512969 394 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.04□□□□□ -1.92
PCNAP12004 RPL7P20-201ENST00000520308 745 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.04□□□□□ -1.92
PCNAP12004 AC134698.4-201ENST00000523451 826 ntBASIC3.04□□□□□ -1.92
PCNAP12004 OR11H5P-201ENST00000554039 926 ntBASIC3.04□□□□□ -1.92
PCNAP12004 MIR5692A1-201ENST00000580523 69 ntBASIC3.04□□□□□ -1.92
PCNAP12004 VN1R80P-201ENST00000597126 338 ntBASIC3.04□□□□□ -1.92
PCNAP12004 CTHRC1P1-201ENST00000605383 469 ntBASIC3.04□□□□□ -1.92
PCNAP12004 RPL23AP88-201ENST00000605759 454 ntBASIC3.04□□□□□ -1.92
PCNAP12004 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
PCNAP12004 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AC006504.8-201ENST00000621046 635 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
PCNAP12004 AC022418.1-201ENST00000624118 445 ntBASIC3.04□□□□□ -1.92
PCNAP12004 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.04□□□□□ -1.92
PCNAP12004 AC099654.14-201ENST00000638599 341 ntBASIC3.04□□□□□ -1.92
PCNAP12004 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCNAP12004 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCNAP12004 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 AC093536.2-201ENST00000565257 1406 ntBASIC3.03□□□□□ -1.92
PCNAP12004 SNORA71.3-201ENST00000362582 128 ntBASIC3.03□□□□□ -1.92
PCNAP12004 RNU6-384P-201ENST00000364900 104 ntBASIC3.03□□□□□ -1.92
PCNAP12004 RNU6-434P-201ENST00000384376 107 ntBASIC3.03□□□□□ -1.92
PCNAP12004 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
PCNAP12004 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AL162578.1-201ENST00000406202 378 ntBASIC3.03□□□□□ -1.92
PCNAP12004 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.03□□□□□ -1.92
PCNAP12004 RNU2-3P-201ENST00000410144 191 ntBASIC3.03□□□□□ -1.92
PCNAP12004 POLHP1-201ENST00000411806 470 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC245054.2-201ENST00000415639 319 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.03□□□□□ -1.92
PCNAP12004 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.03□□□□□ -1.92
PCNAP12004 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.03□□□□□ -1.92
PCNAP12004 AC098614.2-201ENST00000426040 255 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC005300.1-201ENST00000428401 373 ntBASIC3.03□□□□□ -1.92
PCNAP12004 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.03□□□□□ -1.92
PCNAP12004 RPL26P9-201ENST00000457466 433 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC092798.1-201ENST00000458542 409 ntBASIC3.03□□□□□ -1.92
PCNAP12004 RPS27AP10-201ENST00000496103 208 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC008716.1-201ENST00000511084 513 ntBASIC3.03□□□□□ -1.92
PCNAP12004 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.03□□□□□ -1.92
PCNAP12004 AC025465.4-201ENST00000513422 638 ntBASIC3.03□□□□□ -1.92
PCNAP12004 LRRC34P2-201ENST00000514850 553 ntBASIC3.03□□□□□ -1.92
PCNAP12004 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.03□□□□□ -1.92
PCNAP12004 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.03□□□□□ -1.92
PCNAP12004 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.03□□□□□ -1.92
PCNAP12004 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 AC002044.1-201ENST00000606707 158 ntBASIC3.03□□□□□ -1.92
PCNAP12004 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
PCNAP12004 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC009033.1-201ENST00000624279 431 ntBASIC3.03□□□□□ -1.92
PCNAP12004 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PCNAP12004 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PCNAP12004 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.02□□□□□ -1.93
PCNAP12004 Y_RNA.160-201ENST00000363677 92 ntBASIC3.02□□□□□ -1.93
PCNAP12004 SNORD56.5-201ENST00000364281 72 ntBASIC3.02□□□□□ -1.93
PCNAP12004 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCNAP12004 Z98749.2-208ENST00000381646 500 ntBASIC3.02□□□□□ -1.93
PCNAP12004 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCNAP12004 RNY3P14-201ENST00000384309 102 ntBASIC3.02□□□□□ -1.93
PCNAP12004 SNORA46-201ENST00000384762 135 ntBASIC3.02□□□□□ -1.93
PCNAP12004 U3.19-201ENST00000390893 196 ntBASIC3.02□□□□□ -1.93
PCNAP12004 MIR888-201ENST00000401186 77 ntBASIC3.02□□□□□ -1.93
PCNAP12004 AL356057.2-201ENST00000403318 432 ntBASIC3.02□□□□□ -1.93
PCNAP12004 RNU4-26P-201ENST00000410270 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms