Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 Y_RNA.5-201ENST00000362334 102 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 SNORA62.1-201ENST00000364287 154 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 U3.20-201ENST00000390909 217 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 MIR1261-201ENST00000408659 82 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 HMGB3P2-201ENST00000411913 584 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AC092832.1-201ENST00000422934 400 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 MED13P1-201ENST00000428342 171 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 MTATP6P16-201ENST00000434543 526 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.62□□□□□ -1.83
COL3A1P02461 SUMO1P2-201ENST00000452524 304 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 MTCO3P10-201ENST00000455912 772 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 RPS29P15-201ENST00000458329 171 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 snoU13.8-201ENST00000458890 104 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 RNU7-66P-201ENST00000459469 62 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 Y_RNA.654-201ENST00000497848 106 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 TRBVA-201ENST00000498804 316 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AC092436.1-201ENST00000506450 503 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 RNU1-41P-201ENST00000516161 162 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 RNU1-48P-201ENST00000516400 162 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AP000857.1-201ENST00000532151 543 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AP000763.2-201ENST00000540641 163 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.62□□□□□ -1.83
COL3A1P02461 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.62□□□□□ -1.83
COL3A1P02461 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.62□□□□□ -1.83
COL3A1P02461 AC060771.1-201ENST00000582031 164 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.62□□□□□ -1.83
COL3A1P02461 AC136601.2-201ENST00000604356 474 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AL121992.2-201ENST00000606262 256 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 AC012409.4-201ENST00000612923 249 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 uc_338.34-201ENST00000617467 174 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
COL3A1P02461 AC121333.1-201ENST00000567488 2709 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL3A1P02461 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
COL3A1P02461 RNU6-97P-201ENST00000363387 104 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RNU6-82P-201ENST00000363970 107 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RNU6-1029P-201ENST00000384109 107 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RNU6-39P-201ENST00000384344 107 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 Y_RNA.556-201ENST00000384677 113 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RPL31P45-201ENST00000419532 356 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 AL590233.1-201ENST00000430017 456 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 BX276092.4-201ENST00000452056 248 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.61□□□□□ -1.83
COL3A1P02461 MTND1P9-201ENST00000453775 944 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RN7SL432P-201ENST00000484057 298 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.61□□□□□ -1.83
COL3A1P02461 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RNU2-10P-201ENST00000516375 211 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 RNU6-1038P-201ENST00000516516 104 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.61□□□□□ -1.83
COL3A1P02461 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.61□□□□□ -1.83
COL3A1P02461 AC090615.1-201ENST00000577519 154 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.61□□□□□ -1.83
COL3A1P02461 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.61□□□□□ -1.83
COL3A1P02461 RPL23AP92-201ENST00000603609 255 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 Z82243.1-201ENST00000609432 473 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 AL450472.3-201ENST00000615578 367 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.61□□□□□ -1.83
COL3A1P02461 U6.114-201ENST00000636407 96 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.61□□□□□ -1.83
COL3A1P02461 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL3A1P02461 AC244517.1-201ENST00000606030 2086 ntBASIC3.61□□□□□ -1.83
COL3A1P02461 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
COL3A1P02461 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL3A1P02461 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.61□□□□□ -1.83
COL3A1P02461 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL3A1P02461 Y_RNA.22-201ENST00000362492 102 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 RNU6-379P-201ENST00000363813 104 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 Y_RNA.212-201ENST00000364177 102 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 SNORA63.7-201ENST00000365579 123 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 Y_RNA.378-201ENST00000365652 113 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 RNU6-1040P-201ENST00000383974 107 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 Y_RNA.527-201ENST00000384573 102 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL3A1P02461 SSXP10-201ENST00000402595 565 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 RPL7L1P10-201ENST00000427790 463 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.6□□□□□ -1.83
COL3A1P02461 ARL5AP4-201ENST00000430731 512 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.6□□□□□ -1.83
COL3A1P02461 AC108059.3-201ENST00000456388 214 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 RNU7-180P-201ENST00000459240 63 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AC079140.5-201ENST00000507882 310 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.6□□□□□ -1.83
COL3A1P02461 RNA5SP503-201ENST00000517047 117 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL3A1P02461 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.6□□□□□ -1.83
COL3A1P02461 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
COL3A1P02461 MIR3672-201ENST00000584290 82 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 ZNF861P-201ENST00000588126 639 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.6□□□□□ -1.83
COL3A1P02461 AC073539.2-201ENST00000597113 165 ntBASIC3.6□□□□□ -1.83
COL3A1P02461 AC104763.2-201ENST00000604179 382 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms