Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT4O95628 AL022722.2-201ENST00000402519 180 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 AL513475.1-201ENST00000406602 315 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 RPS20P14-201ENST00000412545 360 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 NDUFB4P7-201ENST00000423198 363 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT4O95628 AL592045.1-201ENST00000429867 352 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 FCF1P4-201ENST00000448326 183 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT4O95628 RNU7-169P-201ENST00000459456 61 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 RPL39P38-201ENST00000467018 153 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 AC084357.1-201ENST00000473404 255 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 FO393415.2-201ENST00000480085 343 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 MTND1P19-201ENST00000511780 315 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 APOOP4-201ENST00000513530 597 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 RNU6-927P-201ENST00000516199 100 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.82□□□□□ -1.8
CNOT4O95628 AC090517.1-201ENST00000569307 266 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 MTND6P33-201ENST00000571794 183 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 AL591034.3-201ENST00000605511 685 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 MIR3976-201ENST00000606807 139 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 AC096772.1-201ENST00000609146 564 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CNOT4O95628 RMST_4.1-201ENST00000616886 107 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 Z99571.1-201ENST00000636677 394 ntBASIC3.82□□□□□ -1.8
CNOT4O95628 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.82□□□□□ -1.8
CNOT4O95628 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 Z82217.1-201ENST00000625157 8149 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 UBE2L2-201ENST00000254302 429 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 Y_RNA.19-201ENST00000362462 99 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 Y_RNA.26-201ENST00000362539 101 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 Y_RNA.64-201ENST00000362845 102 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNU6-770P-201ENST00000363929 105 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNU6-806P-201ENST00000365147 105 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNU1-13P-201ENST00000384499 162 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 Y_RNA.562-201ENST00000384695 113 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 AL591034.2-201ENST00000402839 359 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNA5SP317-201ENST00000410176 116 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNU6-1077P-201ENST00000410506 102 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNA5SP311-201ENST00000411290 116 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 AL157831.1-201ENST00000426134 473 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 HSPD1P21-201ENST00000436541 245 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.81□□□□□ -1.8
CNOT4O95628 RNA5SP315-201ENST00000516340 116 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNA5SP312-201ENST00000517068 116 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNU6-1315P-201ENST00000517187 99 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 RNA5SP291-201ENST00000517222 105 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.81□□□□□ -1.8
CNOT4O95628 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
CNOT4O95628 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.81□□□□□ -1.8
CNOT4O95628 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.81□□□□□ -1.8
CNOT4O95628 AC004584.2-201ENST00000570407 410 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 CPDP1-201ENST00000579660 283 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 AC053481.4-201ENST00000583164 216 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 AC123912.5-201ENST00000605470 343 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 MIR1244-1-201ENST00000612829 85 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 MIR1244-3-201ENST00000635744 85 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 MIR1244-2-201ENST00000636449 85 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 MIR1244-4-202ENST00000636813 85 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 MIR492-201ENST00000638676 116 ntBASIC3.81□□□□□ -1.8
CNOT4O95628 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
CNOT4O95628 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT4O95628 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.8□□□□□ -1.8
CNOT4O95628 SPRR2C-201ENST00000290702 219 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RN7SKP280-201ENST00000364196 304 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RNU1-132P-201ENST00000364300 164 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 U8.8-201ENST00000365399 135 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 Y_RNA.477-201ENST00000384352 108 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 SAR1AP2-201ENST00000392696 594 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AL513331.1-201ENST00000411908 397 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.8□□□□□ -1.8
CNOT4O95628 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.8□□□□□ -1.8
CNOT4O95628 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNOT4O95628 AL590664.1-201ENST00000448065 339 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.8□□□□□ -1.8
CNOT4O95628 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RPL30P5-201ENST00000494923 336 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.8□□□□□ -1.8
CNOT4O95628 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.8□□□□□ -1.8
CNOT4O95628 AC008958.1-201ENST00000511047 682 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RNU1-86P-201ENST00000516108 154 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RNU6-397P-201ENST00000516226 104 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 MIR892C-201ENST00000516410 77 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RNU1-107P-201ENST00000516617 154 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 RN7SKP40-201ENST00000517211 242 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.8□□□□□ -1.8
CNOT4O95628 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.8□□□□□ -1.8
CNOT4O95628 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CNOT4O95628 AL158827.2-201ENST00000602494 330 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AL390123.1-201ENST00000603216 237 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AL121917.1-203ENST00000605534 577 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 AC064801.1-201ENST00000612025 407 ntBASIC3.8□□□□□ -1.8
CNOT4O95628 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms