Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAPGEF3O95398 BNIP3P25-201ENST00000596023 559 ntBASIC4.42□□□□□ -1.7
RAPGEF3O95398 AC243960.4-201ENST00000600532 288 ntBASIC4.42□□□□□ -1.7
RAPGEF3O95398 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RAPGEF3O95398 AC022140.2-201ENST00000623500 188 ntBASIC4.42□□□□□ -1.7
RAPGEF3O95398 AP003400.5-201ENST00000624827 617 ntBASIC4.42□□□□□ -1.7
RAPGEF3O95398 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAPGEF3O95398 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAPGEF3O95398 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAPGEF3O95398 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAPGEF3O95398 SNORD113-7-201ENST00000363762 77 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 RNA5SP68-201ENST00000363885 119 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 RNU1-112P-201ENST00000364401 164 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RAPGEF3O95398 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 HMGB3P11-201ENST00000440127 604 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC092001.1-201ENST00000453012 261 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 CEACAMP4-201ENST00000457676 421 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 SNORA70.16-201ENST00000516390 95 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 RNU6-1038P-201ENST00000516516 104 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 RNU6-914P-201ENST00000516749 109 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC105029.1-201ENST00000520250 669 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC092747.3-201ENST00000603769 301 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 MIR15A-201ENST00000607334 83 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 AL132765.2-201ENST00000610812 351 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 U2.17-201ENST00000611454 95 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 TPTEP1-208ENST00000636884 213 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 AC112487.2-201ENST00000637950 304 ntBASIC4.41□□□□□ -1.7
RAPGEF3O95398 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RAPGEF3O95398 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAPGEF3O95398 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RAPGEF3O95398 AC008568.2-201ENST00000623862 2313 ntBASIC4.4□□□□□ -1.7
RAPGEF3O95398 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAPGEF3O95398 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RAPGEF3O95398 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RAPGEF3O95398 UBE2L2-201ENST00000254302 429 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 RNU6-715P-201ENST00000365204 103 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 Y_RNA.509-201ENST00000384506 99 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 Y_RNA.534-201ENST00000384599 112 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 MIR1183-201ENST00000408856 89 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 NDUFA5P4-201ENST00000436704 385 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AL603825.1-201ENST00000438481 80 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 PRPS1P1-201ENST00000445305 876 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 MRPL50P4-201ENST00000446432 475 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 RNU7-167P-201ENST00000459160 62 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC012181.1-201ENST00000479895 423 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 RPS15AP34-201ENST00000487776 387 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC083904.1-201ENST00000487828 231 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC103851.1-201ENST00000506833 274 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 Y_RNA.691-201ENST00000516611 103 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 RNA5SP468-201ENST00000516782 93 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 RNU6-143P-201ENST00000516942 93 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 MIR3690-201ENST00000580266 75 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.4□□□□□ -1.71
RAPGEF3O95398 MIR6817-201ENST00000615588 66 ntBASIC4.4□□□□□ -1.71
RAPGEF3O95398 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAPGEF3O95398 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAPGEF3O95398 HSPA8P4-201ENST00000511877 1920 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 U8.2-201ENST00000363156 134 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 RNU6-1167P-201ENST00000363227 94 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 RNU4-76P-201ENST00000364509 141 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 SNORA16.2-201ENST00000390991 127 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 AL139397.2-201ENST00000404529 772 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 NDUFB4P5-201ENST00000415445 361 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 RNU7-66P-201ENST00000459469 62 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 RPL21P93-201ENST00000480465 489 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 AC079140.5-201ENST00000507882 310 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 RNU6-864P-201ENST00000516256 108 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 GLYCAM1-201ENST00000546596 285 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.39□□□□□ -1.71
RAPGEF3O95398 Z82243.1-201ENST00000609432 473 ntBASIC4.39□□□□□ -1.71
RAPGEF3O95398 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAPGEF3O95398 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAPGEF3O95398 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms