Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SNORD115-3-201ENST00000363100 82 ntBASIC1.63□□□□□ -2.15
VAPBO95292 RNU6-1032P-201ENST00000384100 107 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL136310.1-201ENST00000404926 654 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.63□□□□□ -2.15
VAPBO95292 AL358453.1-201ENST00000422522 250 ntBASIC1.63□□□□□ -2.15
VAPBO95292 RAC1P6-201ENST00000423911 575 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPBO95292 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.63□□□□□ -2.15
VAPBO95292 AC006512.1-201ENST00000468816 291 ntBASIC1.63□□□□□ -2.15
VAPBO95292 RPL7P18-201ENST00000478965 734 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC018868.1-201ENST00000491307 315 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC020699.1-201ENST00000505161 445 ntBASIC1.63□□□□□ -2.15
VAPBO95292 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.63□□□□□ -2.15
VAPBO95292 SNORA19.3-201ENST00000516165 130 ntBASIC1.63□□□□□ -2.15
VAPBO95292 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.63□□□□□ -2.15
VAPBO95292 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
VAPBO95292 MIR3945-201ENST00000581853 98 ntBASIC1.63□□□□□ -2.15
VAPBO95292 BNIP3P25-201ENST00000596023 559 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC073410.2-201ENST00000603240 332 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL078605.1-201ENST00000603529 500 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.6-201ENST00000603753 252 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.11-201ENST00000604059 253 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC008162.1-201ENST00000604718 254 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.1-201ENST00000604752 252 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.5-201ENST00000605253 252 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.12-201ENST00000605291 253 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.8-201ENST00000605353 252 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AL670379.7-201ENST00000605823 252 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC018638.7-201ENST00000605836 1114 ntBASIC1.63□□□□□ -2.15
VAPBO95292 MIR502-201ENST00000606349 86 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC068944.2-201ENST00000610373 403 ntBASIC1.63□□□□□ -2.15
VAPBO95292 AC099786.3-201ENST00000565735 1410 ntBASIC1.63□□□□□ -2.15
VAPBO95292 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VAPBO95292 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VAPBO95292 MTND4P23-201ENST00000447723 1363 ntBASIC1.62□□□□□ -2.15
VAPBO95292 SNORA8-201ENST00000384574 139 ntBASIC1.62□□□□□ -2.15
VAPBO95292 MIR29C-201ENST00000385231 88 ntBASIC1.62□□□□□ -2.15
VAPBO95292 RNA5SP212-201ENST00000391223 107 ntBASIC1.62□□□□□ -2.15
VAPBO95292 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAPBO95292 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAPBO95292 MIR1305-201ENST00000408300 86 ntBASIC1.62□□□□□ -2.15
VAPBO95292 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
VAPBO95292 RPS12P24-201ENST00000412619 387 ntBASIC1.62□□□□□ -2.15
VAPBO95292 VPS26BP1-201ENST00000417155 755 ntBASIC1.62□□□□□ -2.15
VAPBO95292 OOSP1P1-201ENST00000423265 274 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.62□□□□□ -2.15
VAPBO95292 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPBO95292 AC245102.2-201ENST00000448956 180 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AL513124.1-201ENST00000450410 614 ntBASIC1.62□□□□□ -2.15
VAPBO95292 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPBO95292 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
VAPBO95292 RNA5SP57-201ENST00000459463 123 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AC021146.8-201ENST00000507455 733 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPBO95292 RNU6-667P-201ENST00000517186 102 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AC009902.1-201ENST00000519351 183 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPBO95292 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPBO95292 DEFB122-202ENST00000569013 197 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AC021646.1-201ENST00000605469 484 ntBASIC1.62□□□□□ -2.15
VAPBO95292 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
VAPBO95292 AC108479.2-201ENST00000617314 601 ntBASIC1.62□□□□□ -2.15
VAPBO95292 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.62□□□□□ -2.15
VAPBO95292 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
VAPBO95292 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.62□□□□□ -2.15
VAPBO95292 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
VAPBO95292 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.62□□□□□ -2.15
VAPBO95292 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.61□□□□□ -2.15
VAPBO95292 Y_RNA.192-201ENST00000363977 102 ntBASIC1.61□□□□□ -2.15
VAPBO95292 RNU1-57P-201ENST00000384491 166 ntBASIC1.61□□□□□ -2.15
VAPBO95292 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
VAPBO95292 VN1R36P-201ENST00000414936 291 ntBASIC1.61□□□□□ -2.15
VAPBO95292 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPBO95292 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPBO95292 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPBO95292 USP9YP24-201ENST00000434374 697 ntBASIC1.61□□□□□ -2.15
VAPBO95292 MTND2P29-201ENST00000438595 412 ntBASIC1.61□□□□□ -2.15
VAPBO95292 EEF1A1P39-201ENST00000440791 250 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.61□□□□□ -2.15
VAPBO95292 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.61□□□□□ -2.15
VAPBO95292 SSXP1-201ENST00000453640 473 ntBASIC1.61□□□□□ -2.15
VAPBO95292 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.61□□□□□ -2.15
VAPBO95292 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAPBO95292 FAM92A1P2-202ENST00000504766 877 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.61□□□□□ -2.15
VAPBO95292 AC109927.2-201ENST00000506416 303 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AC116337.1-201ENST00000509680 687 ntBASIC1.61□□□□□ -2.15
VAPBO95292 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
VAPBO95292 CBX3P4-201ENST00000538909 354 ntBASIC1.61□□□□□ -2.15
VAPBO95292 SEPT7P9-203ENST00000604116 343 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AL358072.1-201ENST00000604156 575 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AC007363.1-201ENST00000604736 620 ntBASIC1.61□□□□□ -2.15
VAPBO95292 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAPBO95292 AC072039.2-201ENST00000608883 439 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AC093788.1-201ENST00000609356 927 ntBASIC1.61□□□□□ -2.15
VAPBO95292 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AC091834.1-201ENST00000614543 472 ntBASIC1.61□□□□□ -2.15
VAPBO95292 AL138955.1-201ENST00000622881 1040 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms