Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MTCO2P11-201ENST00000431069 680 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.13□□□□□ -1.91
MBD4O95243 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.13□□□□□ -1.91
MBD4O95243 RPS3P1-201ENST00000456781 192 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD4O95243 FAM92A1P2-202ENST00000504766 877 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AC116655.1-201ENST00000508324 901 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
MBD4O95243 RNA5SP76-201ENST00000516277 87 ntBASIC3.13□□□□□ -1.91
MBD4O95243 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
MBD4O95243 RN7SKP40-201ENST00000517211 242 ntBASIC3.13□□□□□ -1.91
MBD4O95243 OR5BN1P-201ENST00000532955 829 ntBASIC3.13□□□□□ -1.91
MBD4O95243 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD4O95243 MIR5692A1-201ENST00000580523 69 ntBASIC3.13□□□□□ -1.91
MBD4O95243 MIR4775-201ENST00000581168 75 ntBASIC3.13□□□□□ -1.91
MBD4O95243 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
MBD4O95243 AL359198.2-201ENST00000611836 194 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.13□□□□□ -1.91
MBD4O95243 AC011155.2-201ENST00000623202 216 ntBASIC3.13□□□□□ -1.91
MBD4O95243 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.13□□□□□ -1.91
MBD4O95243 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.13□□□□□ -1.91
MBD4O95243 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MBD4O95243 Y_RNA.51-201ENST00000362725 102 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNU6-1287P-201ENST00000362914 107 ntBASIC3.12□□□□□ -1.91
MBD4O95243 U3.12-201ENST00000364498 214 ntBASIC3.12□□□□□ -1.91
MBD4O95243 Y_RNA.359-201ENST00000365498 102 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNU6-1060P-201ENST00000384664 107 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNU6-606P-201ENST00000384721 111 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNU2-25P-201ENST00000411041 191 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNA5SP492-201ENST00000411330 114 ntBASIC3.12□□□□□ -1.91
MBD4O95243 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD4O95243 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD4O95243 AL365338.1-201ENST00000422282 858 ntBASIC3.12□□□□□ -1.91
MBD4O95243 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
MBD4O95243 MTND1P29-201ENST00000448112 647 ntBASIC3.12□□□□□ -1.91
MBD4O95243 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD4O95243 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MBD4O95243 MTCO2P18-201ENST00000457151 658 ntBASIC3.12□□□□□ -1.91
MBD4O95243 AC079382.1-201ENST00000493346 557 ntBASIC3.12□□□□□ -1.91
MBD4O95243 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.12□□□□□ -1.91
MBD4O95243 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
MBD4O95243 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.12□□□□□ -1.91
MBD4O95243 RNA5SP503-201ENST00000517047 117 ntBASIC3.12□□□□□ -1.91
MBD4O95243 OR5AQ1P-201ENST00000527596 927 ntBASIC3.12□□□□□ -1.91
MBD4O95243 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.12□□□□□ -1.91
MBD4O95243 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.12□□□□□ -1.91
MBD4O95243 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.12□□□□□ -1.91
MBD4O95243 MIR6817-201ENST00000615588 66 ntBASIC3.12□□□□□ -1.91
MBD4O95243 AC136475.10-201ENST00000620253 385 ntBASIC3.12□□□□□ -1.91
MBD4O95243 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
MBD4O95243 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MBD4O95243 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
MBD4O95243 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MBD4O95243 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
MBD4O95243 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MBD4O95243 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MBD4O95243 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MBD4O95243 RNU6-1042P-201ENST00000384204 107 ntBASIC3.11□□□□□ -1.91
MBD4O95243 RNU6-1119P-201ENST00000384349 108 ntBASIC3.11□□□□□ -1.91
MBD4O95243 RNU6-1179P-201ENST00000384667 107 ntBASIC3.11□□□□□ -1.91
MBD4O95243 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MBD4O95243 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD4O95243 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD4O95243 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD4O95243 AC011816.1-201ENST00000441346 546 ntBASIC3.11□□□□□ -1.91
MBD4O95243 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.11□□□□□ -1.91
MBD4O95243 HMGB1P30-201ENST00000492455 606 ntBASIC3.11□□□□□ -1.91
MBD4O95243 SNORA31.6-201ENST00000516241 130 ntBASIC3.11□□□□□ -1.91
MBD4O95243 ACA59.2-201ENST00000517061 156 ntBASIC3.11□□□□□ -1.91
MBD4O95243 AC243972.3-201ENST00000539655 198 ntBASIC3.11□□□□□ -1.91
MBD4O95243 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.11□□□□□ -1.91
MBD4O95243 AP000787.2-201ENST00000604432 568 ntBASIC3.11□□□□□ -1.91
MBD4O95243 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.11□□□□□ -1.91
MBD4O95243 AC009090.3-201ENST00000616553 565 ntBASIC3.11□□□□□ -1.91
MBD4O95243 AC048344.4-201ENST00000619744 527 ntBASIC3.11□□□□□ -1.91
MBD4O95243 HSPA8P4-201ENST00000511877 1920 ntBASIC3.11□□□□□ -1.91
MBD4O95243 AC093536.2-201ENST00000565257 1406 ntBASIC3.1□□□□□ -1.91
MBD4O95243 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
MBD4O95243 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MBD4O95243 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.1□□□□□ -1.91
MBD4O95243 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
MBD4O95243 MIR449A-201ENST00000362113 91 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNU6-1120P-201ENST00000362988 108 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNA5SP68-201ENST00000363885 119 ntBASIC3.1□□□□□ -1.91
MBD4O95243 SNORD14B-201ENST00000364533 90 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNU1-100P-201ENST00000365255 165 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNU6-116P-201ENST00000384042 109 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNU5A-6P-201ENST00000384136 116 ntBASIC3.1□□□□□ -1.91
MBD4O95243 MIR578-201ENST00000384828 96 ntBASIC3.1□□□□□ -1.91
MBD4O95243 Y_RNA.582-201ENST00000391023 95 ntBASIC3.1□□□□□ -1.91
MBD4O95243 RNU6-550P-201ENST00000391057 101 ntBASIC3.1□□□□□ -1.91
MBD4O95243 DEFB108C-201ENST00000400154 252 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.1□□□□□ -1.91
MBD4O95243 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AL596276.1-201ENST00000434465 418 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.1□□□□□ -1.91
MBD4O95243 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.1□□□□□ -1.91
MBD4O95243 RPS29P15-201ENST00000458329 171 ntBASIC3.1□□□□□ -1.91
MBD4O95243 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MBD4O95243 AC105313.1-201ENST00000509121 353 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms