Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-313P-201ENST00000516317 112 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM13O60858 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.98□□□□□ -1.77
TRIM13O60858 RAB9BP1-201ENST00000519581 626 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM13O60858 AL442163.3-201ENST00000554110 156 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 LRRC37A5P-203ENST00000580181 585 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 MIR5692A1-201ENST00000580523 69 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.98□□□□□ -1.77
TRIM13O60858 AC098826.3-201ENST00000603823 466 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
TRIM13O60858 UBE3AP2-201ENST00000429033 2259 ntBASIC3.98□□□□□ -1.77
TRIM13O60858 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM13O60858 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM13O60858 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM13O60858 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRIM13O60858 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TRIM13O60858 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM13O60858 AC090740.1-201ENST00000623193 2262 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM13O60858 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM13O60858 AP001148.1-201ENST00000624124 2359 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TRIM13O60858 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TRIM13O60858 Y_RNA.143-201ENST00000363520 106 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 Y_RNA.240-201ENST00000364469 95 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 U3.13-201ENST00000364804 214 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 RN7SKP177-201ENST00000410567 355 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 RPL19P1-201ENST00000411635 428 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AC006466.1-201ENST00000438721 289 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM13O60858 AL360271.2-201ENST00000447710 161 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 RPL23AP24-201ENST00000458203 385 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 VN1R105P-201ENST00000486595 910 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AC099522.1-202ENST00000514718 367 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 RNA5SP143-201ENST00000516936 115 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM13O60858 AC091144.1-201ENST00000519573 138 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM13O60858 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM13O60858 TVP23BP1-201ENST00000557500 617 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AC025627.2-201ENST00000576220 160 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 SNORD84-203ENST00000584275 78 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AL078605.1-201ENST00000603529 500 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM13O60858 AL450472.3-201ENST00000615578 367 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 HAUS6P2-201ENST00000433254 2404 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM13O60858 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM13O60858 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
TRIM13O60858 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM13O60858 MTND5P9-201ENST00000503854 1755 ntBASIC3.97□□□□□ -1.77
TRIM13O60858 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.96□□□□□ -1.77
TRIM13O60858 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
TRIM13O60858 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM13O60858 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM13O60858 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM13O60858 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNVU1-6-201ENST00000364688 164 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 Y_RNA.398-201ENST00000383952 99 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNU6-102P-201ENST00000384485 104 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNA5SP494-201ENST00000410653 129 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNU6-607P-201ENST00000411283 108 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM13O60858 RPS12P23-201ENST00000419579 400 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 TMEM167AP1-201ENST00000423409 219 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 AC090774.1-201ENST00000435925 246 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 NUTF2P3-201ENST00000448540 384 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 AL500522.2-201ENST00000448562 343 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 AC133134.1-201ENST00000466800 359 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM13O60858 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 RNU6-62P-201ENST00000516526 102 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM13O60858 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM13O60858 AL121603.1-201ENST00000553815 142 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 MIR5684-201ENST00000585074 65 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM13O60858 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM13O60858 SNORD39.4-201ENST00000620099 78 ntBASIC3.96□□□□□ -1.78
TRIM13O60858 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM13O60858 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM13O60858 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM13O60858 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 NCAPGP1-201ENST00000505112 1814 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC007785.2-201ENST00000598627 1916 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM13O60858 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 SNORD113-8-201ENST00000363497 74 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 RNU6-290P-201ENST00000365212 101 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 RNU6-959P-201ENST00000384671 107 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 MIR578-201ENST00000384828 96 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms