Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC136619.2-201ENST00000563361 631 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC022254.1-201ENST00000567857 235 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.51□□□□□ -2.17
SGCEO43556 MIR3945-201ENST00000581853 98 ntBASIC1.51□□□□□ -2.17
SGCEO43556 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.51□□□□□ -2.17
SGCEO43556 AC099842.1-201ENST00000619919 596 ntBASIC1.51□□□□□ -2.17
SGCEO43556 U1.36-201ENST00000620684 176 ntBASIC1.51□□□□□ -2.17
SGCEO43556 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.51□□□□□ -2.17
SGCEO43556 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
SGCEO43556 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
SGCEO43556 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SGCEO43556 RNU6-701P-201ENST00000384059 107 ntBASIC1.5□□□□□ -2.17
SGCEO43556 RNU6-1032P-201ENST00000384100 107 ntBASIC1.5□□□□□ -2.17
SGCEO43556 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
SGCEO43556 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SGCEO43556 AC138623.1-201ENST00000418060 216 ntBASIC1.5□□□□□ -2.17
SGCEO43556 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.5□□□□□ -2.17
SGCEO43556 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AL078601.1-201ENST00000444542 271 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AL360221.1-201ENST00000445989 335 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.5□□□□□ -2.17
SGCEO43556 FCF1P6-201ENST00000456841 595 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC027575.1-201ENST00000481064 460 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC016550.1-201ENST00000505348 785 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC109927.2-201ENST00000506416 303 ntBASIC1.5□□□□□ -2.17
SGCEO43556 SNORA31.19-201ENST00000517079 126 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.5□□□□□ -2.17
SGCEO43556 AC109329.1-201ENST00000518744 317 ntBASIC1.5□□□□□ -2.17
SGCEO43556 MTND1P36-201ENST00000522384 936 ntBASIC1.5□□□□□ -2.17
SGCEO43556 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.5□□□□□ -2.17
SGCEO43556 IMMP1LP2-201ENST00000552954 492 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC104581.2-201ENST00000572227 430 ntBASIC1.5□□□□□ -2.17
SGCEO43556 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AP001981.2-201ENST00000603241 418 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AL596327.1-201ENST00000603629 213 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC131235.4-201ENST00000609288 620 ntBASIC1.5□□□□□ -2.17
SGCEO43556 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.5□□□□□ -2.17
SGCEO43556 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SGCEO43556 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.5□□□□□ -2.17
SGCEO43556 AC092192.1-201ENST00000633154 1018 ntBASIC1.5□□□□□ -2.17
SGCEO43556 AC099654.8-201ENST00000637757 681 ntBASIC1.5□□□□□ -2.17
SGCEO43556 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SGCEO43556 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SGCEO43556 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.49□□□□□ -2.17
SGCEO43556 AC092125.1-201ENST00000562568 1995 ntBASIC1.49□□□□□ -2.17
SGCEO43556 RNU5A-8P-201ENST00000364102 114 ntBASIC1.49□□□□□ -2.17
SGCEO43556 RPS12P24-201ENST00000412619 387 ntBASIC1.49□□□□□ -2.17
SGCEO43556 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.49□□□□□ -2.17
SGCEO43556 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 HMGN2P3-201ENST00000433603 273 ntBASIC1.49□□□□□ -2.17
SGCEO43556 HMGN2P5-201ENST00000436882 273 ntBASIC1.49□□□□□ -2.17
SGCEO43556 RNA5SP57-201ENST00000459463 123 ntBASIC1.49□□□□□ -2.17
SGCEO43556 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SGCEO43556 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.49□□□□□ -2.17
SGCEO43556 SNORA44.1-201ENST00000517031 108 ntBASIC1.49□□□□□ -2.17
SGCEO43556 CYCSP27-201ENST00000527643 293 ntBASIC1.49□□□□□ -2.17
SGCEO43556 AK6P1-201ENST00000540219 478 ntBASIC1.49□□□□□ -2.17
SGCEO43556 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.49□□□□□ -2.17
SGCEO43556 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
SGCEO43556 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SGCEO43556 AC073410.2-201ENST00000603240 332 ntBASIC1.49□□□□□ -2.17
SGCEO43556 AL158211.2-201ENST00000607282 395 ntBASIC1.49□□□□□ -2.17
SGCEO43556 MIR6845-201ENST00000613182 61 ntBASIC1.49□□□□□ -2.17
SGCEO43556 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SGCEO43556 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SGCEO43556 AL356292.1-201ENST00000283110 373 ntBASIC1.48□□□□□ -2.17
SGCEO43556 SNORD115-3-201ENST00000363100 82 ntBASIC1.48□□□□□ -2.17
SGCEO43556 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
SGCEO43556 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SGCEO43556 RNU6-611P-201ENST00000384276 104 ntBASIC1.48□□□□□ -2.17
SGCEO43556 MIR1283-2-201ENST00000408621 87 ntBASIC1.48□□□□□ -2.17
SGCEO43556 UBE2V1P4-201ENST00000425374 344 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.48□□□□□ -2.17
SGCEO43556 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.48□□□□□ -2.17
SGCEO43556 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.48□□□□□ -2.17
SGCEO43556 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
SGCEO43556 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.48□□□□□ -2.17
SGCEO43556 AC012308.1-201ENST00000451232 178 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RN7SL429P-201ENST00000479090 223 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RN7SL489P-201ENST00000486185 223 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RN7SL327P-201ENST00000488659 223 ntBASIC1.48□□□□□ -2.17
SGCEO43556 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.48□□□□□ -2.17
SGCEO43556 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SGCEO43556 MTND4P2-201ENST00000507767 1203 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AC112198.4-201ENST00000515450 351 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
SGCEO43556 AP000907.2-201ENST00000530827 353 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AP000873.5-201ENST00000533906 236 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AC092451.2-201ENST00000538746 658 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AP000763.2-201ENST00000540641 163 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AL356432.3-201ENST00000568952 465 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AL358072.1-201ENST00000604156 575 ntBASIC1.48□□□□□ -2.17
SGCEO43556 AC098614.4-201ENST00000607601 462 ntBASIC1.48□□□□□ -2.17
SGCEO43556 RN7SL853P-201ENST00000617250 223 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms