Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL359881.1-201ENST00000602916 267 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXA2O43364 AC010332.2-201ENST00000613083 1904 ntBASIC5.26□□□□□ -1.57
HOXA2O43364 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA2O43364 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HOXA2O43364 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXA2O43364 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA2O43364 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HOXA2O43364 Z95331.1-201ENST00000623075 23112 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA2O43364 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA2O43364 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA2O43364 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA2O43364 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
HOXA2O43364 RNU6-1141P-201ENST00000364520 107 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA2O43364 AL357075.1-201ENST00000404107 726 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 AL035461.1-201ENST00000421490 332 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA2O43364 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA2O43364 RN7SKP122-201ENST00000515923 296 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 RNU1-6P-201ENST00000516290 144 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 RNU6-155P-201ENST00000516347 100 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 AC018448.1-201ENST00000552843 316 ntBASIC5.25□□□□□ -1.57
HOXA2O43364 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
HOXA2O43364 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
HOXA2O43364 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HOXA2O43364 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA2O43364 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA2O43364 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA2O43364 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA2O43364 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA2O43364 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA2O43364 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.24□□□□□ -1.57
HOXA2O43364 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA2O43364 AL590240.1-201ENST00000334118 313 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RNU6-239P-201ENST00000390990 99 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RN7SKP61-201ENST00000410642 295 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RPL18P10-201ENST00000425606 538 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC091390.1-201ENST00000433904 331 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC000111.2-201ENST00000448200 210 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RPS17P2-201ENST00000461663 408 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC020890.1-201ENST00000491837 504 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA2O43364 SNORA31.8-201ENST00000516327 108 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RNU1-103P-201ENST00000516502 125 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 RNA5SP392-201ENST00000516905 112 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXA2O43364 AC133555.2-201ENST00000550213 292 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AL110118.1-201ENST00000553543 400 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC021231.3-201ENST00000558497 370 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC136624.4-201ENST00000573044 370 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AL121932.1-201ENST00000605542 214 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA2O43364 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA2O43364 AC139713.2-214ENST00000642059 1811 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 AL031595.2-201ENST00000624215 19071 ntBASIC5.24□□□□□ -1.57
HOXA2O43364 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HOXA2O43364 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HOXA2O43364 MTND5P35-201ENST00000557537 1720 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 RNU6-275P-201ENST00000364910 107 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 SNORA70F-201ENST00000384142 135 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 Y_RNA.498-201ENST00000384460 102 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 MIR544A-201ENST00000384855 91 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 AL357515.1-201ENST00000402967 542 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA2O43364 RAB28P5-201ENST00000427490 651 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 CR769767.1-201ENST00000436337 346 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 AC007969.2-201ENST00000441891 191 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 RPL37P4-201ENST00000448908 268 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 RPS20P10-201ENST00000451209 253 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXA2O43364 RNA5SP272-201ENST00000516095 111 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 RNU6-919P-201ENST00000516731 104 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA2O43364 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXA2O43364 SNORA74C-1-201ENST00000580726 201 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 LINC00901.1-201ENST00000617252 152 ntBASIC5.23□□□□□ -1.57
HOXA2O43364 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HOXA2O43364 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HOXA2O43364 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXA2O43364 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA2O43364 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA2O43364 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA2O43364 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 AC092268.1-201ENST00000342691 405 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 Y_RNA.101-201ENST00000363154 102 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 Y_RNA.179-201ENST00000363844 90 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 Y_RNA.261-201ENST00000364631 102 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA2O43364 RNU6-44P-201ENST00000384045 107 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 RNU6-1310P-201ENST00000384153 107 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 U3.32-201ENST00000408116 212 ntBASIC5.22□□□□□ -1.57
HOXA2O43364 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA2O43364 RPL26P27-201ENST00000414397 437 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms