Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AL356432.1-201ENST00000405809 419 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RPL5P18-201ENST00000406671 891 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 Y_RNA.623-201ENST00000411128 95 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXN3O00409 RPL26P27-201ENST00000414397 437 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RPL31P12-201ENST00000422587 358 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC005300.1-201ENST00000428401 373 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 MYL8P-204ENST00000431574 518 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXN3O00409 BRK1P2-201ENST00000442875 223 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RPL7P12-201ENST00000446719 750 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXN3O00409 RNU7-167P-201ENST00000459160 62 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC007547.1-201ENST00000462177 490 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXN3O00409 AC128713.1-201ENST00000471495 306 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RPS27AP10-201ENST00000496103 208 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 Y_RNA.665-201ENST00000516177 98 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 MIR892C-201ENST00000516410 77 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 RNU6-1183P-201ENST00000517054 60 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.53□□□□□ -1.84
FOXN3O00409 HPRT1P3-201ENST00000539521 576 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 OR11H5P-201ENST00000554039 926 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC044792.1-201ENST00000593294 196 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AC024220.1-201ENST00000603675 484 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 U3.45-201ENST00000607547 219 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.53□□□□□ -1.84
FOXN3O00409 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
FOXN3O00409 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FOXN3O00409 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXN3O00409 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXN3O00409 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXN3O00409 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
FOXN3O00409 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
FOXN3O00409 RNA5SP119-201ENST00000362715 117 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 RNA5SP50-201ENST00000363731 107 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 RNU6-82P-201ENST00000363970 107 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 RNU6-166P-201ENST00000384371 107 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 MIR200C-201ENST00000384980 68 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 AL592148.1-201ENST00000413568 445 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXN3O00409 CST9LP2-201ENST00000437612 320 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXN3O00409 AL118496.2-201ENST00000448300 230 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 RN7SL293P-201ENST00000481765 281 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXN3O00409 RN7SKP282-201ENST00000516824 299 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN3O00409 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.52□□□□□ -1.85
FOXN3O00409 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN3O00409 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
FOXN3O00409 DNAJC8P1-201ENST00000554535 372 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 SCOCP1-201ENST00000554676 349 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 NUTF2P8-201ENST00000604593 363 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 CTHRC1P1-201ENST00000605383 469 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 AL355365.1-201ENST00000616480 294 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 RMST_7.1-201ENST00000621935 268 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 AC073476.4-201ENST00000628409 72 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 U2.21-201ENST00000637295 81 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXN3O00409 ADAM3A-203ENST00000461344 2157 ntBASIC3.52□□□□□ -1.85
FOXN3O00409 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
FOXN3O00409 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
FOXN3O00409 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXN3O00409 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXN3O00409 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN3O00409 RNU6-266P-201ENST00000364225 107 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 RNU6-522P-201ENST00000364497 107 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 RNU6-898P-201ENST00000365627 104 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 CD24P4-201ENST00000382840 243 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AL122016.1-201ENST00000403365 367 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 RNA5SP229-201ENST00000410809 99 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 NDUFB4P5-201ENST00000415445 361 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 RPL35AP12-201ENST00000425362 338 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.51□□□□□ -1.85
FOXN3O00409 CYCSP32-201ENST00000440548 321 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.51□□□□□ -1.85
FOXN3O00409 AC233279.1-201ENST00000455300 423 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC008155.2-201ENST00000464337 397 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC092185.1-201ENST00000491371 97 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC103851.1-201ENST00000506833 274 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 SNORA19.2-201ENST00000516013 114 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 RNU6-273P-201ENST00000516937 96 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN3O00409 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.51□□□□□ -1.85
FOXN3O00409 MTCO3P23-201ENST00000561363 289 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC243960.4-201ENST00000600532 288 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AL645944.1-201ENST00000603857 493 ntBASIC3.51□□□□□ -1.85
FOXN3O00409 AC019176.2-201ENST00000611579 315 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms