Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.38□□□□□ -2.03
SLC28A1O00337 MIR4658-201ENST00000584344 65 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 BNIP3P22-201ENST00000593399 556 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AL670379.10-201ENST00000604330 253 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AL670379.9-201ENST00000605428 253 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC28A1O00337 AC092656.1-203ENST00000624134 423 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC138627.2-201ENST00000624202 601 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 MTND5P17-201ENST00000418405 1603 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 AC080100.1-201ENST00000624239 5356 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC28A1O00337 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC28A1O00337 AL365361.1-201ENST00000566942 3481 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 RNU6-1097P-201ENST00000363586 107 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 SNORD14B-201ENST00000364533 90 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 RNU6-108P-201ENST00000365558 107 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 RNU6-1179P-201ENST00000384667 107 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 MIR578-201ENST00000384828 96 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 MIR34A-201ENST00000385130 110 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AL139039.1-201ENST00000401900 692 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 FTH1P15-201ENST00000406984 280 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 U6atac.2-201ENST00000408644 118 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AL031779.1-201ENST00000415663 330 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AC090960.1-201ENST00000421072 306 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 ARL5AP4-201ENST00000430731 512 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.37□□□□□ -2.03
SLC28A1O00337 RPL23AP45-201ENST00000476406 468 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 Y_RNA.695-201ENST00000516715 107 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 RNU6-685P-201ENST00000517088 95 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC28A1O00337 OR5AL2P-201ENST00000532185 920 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AC025678.1-201ENST00000567861 338 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC012213.3-201ENST00000577199 777 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AL138889.2-201ENST00000603883 242 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AL161756.2-201ENST00000604597 246 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 OR2AS2P-201ENST00000606902 342 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.37□□□□□ -2.03
SLC28A1O00337 AL158063.1-201ENST00000615349 536 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AL359740.1-201ENST00000624340 592 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.37□□□□□ -2.03
SLC28A1O00337 U6.114-201ENST00000636407 96 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 MIR3974-201ENST00000637126 96 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SLC28A1O00337 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
SLC28A1O00337 Z75746.1-201ENST00000440243 2080 ntBASIC2.37□□□□□ -2.03
SLC28A1O00337 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC28A1O00337 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC138393.1-203ENST00000327086 343 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 RNU6-858P-201ENST00000362436 107 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 SNORA38-201ENST00000363946 132 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 RNY3P9-201ENST00000384727 106 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 Y_RNA.576-201ENST00000384781 102 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 MIR10A-201ENST00000385043 110 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 CIR1P3-201ENST00000405137 479 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 RNU2-52P-201ENST00000410680 190 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AC096664.2-201ENST00000411843 406 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC28A1O00337 EEF1A1P40-201ENST00000412883 573 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 BX295541.1-201ENST00000417774 250 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 COTL1P1-201ENST00000422309 375 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 MTCYBP5-201ENST00000423752 1135 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 MTCO3P5-201ENST00000433620 714 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC104058.1-201ENST00000448028 297 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC096576.1-201ENST00000489014 359 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC104806.1-201ENST00000508720 308 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC010486.3-201ENST00000511602 785 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 MTCO3P28-201ENST00000513351 515 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.36□□□□□ -2.03
SLC28A1O00337 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC040904.1-201ENST00000590850 223 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC28A1O00337 RNU6-91P-201ENST00000607774 107 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AC010378.1-201ENST00000619270 362 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.36□□□□□ -2.03
SLC28A1O00337 AC244517.12-201ENST00000623581 663 ntBASIC2.36□□□□□ -2.03
SLC28A1O00337 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.36□□□□□ -2.03
SLC28A1O00337 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms