Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 SCARNA3-201ENST00000517097 143 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 OR5BN1P-201ENST00000532955 829 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC091544.4-201ENST00000555268 342 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AL157871.3-201ENST00000557231 293 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 MIR3913-1-201ENST00000577744 102 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC119751.7-201ENST00000600494 245 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC008121.1-201ENST00000603244 268 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AL645944.1-201ENST00000603857 493 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC012409.4-201ENST00000612923 249 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AC011890.2-201ENST00000613393 294 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AL158063.1-201ENST00000615349 536 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 AL359547.2-201ENST00000615810 418 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 Z69908.1-201ENST00000622603 247 ntBASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
NPIPA2E9PIF3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 MIR1302-8-201ENST00000408342 128 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 RNU6-248P-201ENST00000410720 107 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 RNA5SP111-201ENST00000411386 101 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 USP9YP20-201ENST00000419224 558 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 OOSP1P1-201ENST00000423265 274 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 PTGES3P4-201ENST00000426243 356 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AL031667.1-201ENST00000440222 725 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC011816.1-201ENST00000441346 546 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 USP9YP29-201ENST00000445112 563 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 FAM92A1P2-202ENST00000504766 877 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC117522.2-201ENST00000510049 657 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 RNA5SP282-201ENST00000516355 108 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC090572.1-201ENST00000519251 160 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 MTND2P38-201ENST00000522536 667 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 MIR3199-1-201ENST00000582434 88 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC098848.2-201ENST00000588023 330 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC007621.1-201ENST00000604544 437 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AL021997.1-201ENST00000605757 193 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC098614.4-201ENST00000607601 462 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 AC010678.1-201ENST00000614118 713 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 CU459211.1-201ENST00000635667 749 ntBASIC2.32□□□□□ -2.04
NPIPA2E9PIF3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 XGY1-201ENST00000381172 446 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 MIR147B-201ENST00000390185 80 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 RN7SKP284-201ENST00000411002 343 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 C1DP2-201ENST00000418167 426 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL353706.1-201ENST00000436728 494 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 MTND1P27-201ENST00000451117 902 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC116562.3-201ENST00000506136 177 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC117532.1-201ENST00000514638 323 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 Y_RNA.688-201ENST00000516565 95 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC068587.5-201ENST00000528506 175 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 LINC00933-203ENST00000559812 219 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 MIR3945-201ENST00000581853 98 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 MIR4765-201ENST00000585007 77 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 Z84480.1-201ENST00000605131 311 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL670379.4-201ENST00000605279 254 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL139286.2-201ENST00000606838 396 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 HMGB1P24-202ENST00000615653 685 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC025034.2-201ENST00000623264 286 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 AL157786.1-207ENST00000627771 695 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms