Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AL359693.1-201ENST00000614959 2407 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-623P-201ENST00000363143 105 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 SNORA62.1-201ENST00000364287 154 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-456P-201ENST00000384493 107 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 MIR558-201ENST00000384920 94 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RPS4XP7-201ENST00000406274 780 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 NDUFB4P7-201ENST00000423198 363 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 ISCA1P1-201ENST00000426679 387 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL365496.1-201ENST00000426885 215 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL592045.1-201ENST00000429867 352 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC000111.3-201ENST00000433478 193 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 HMGB3P12-201ENST00000438745 556 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 CBWD4P-201ENST00000445695 655 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC132479.1-201ENST00000449160 144 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL021397.1-201ENST00000451806 248 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RPL23AP70-201ENST00000483361 460 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-720P-201ENST00000516363 108 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 SCARNA15.2-201ENST00000516409 127 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RNA5SP281-201ENST00000516504 135 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-1092P-201ENST00000516955 87 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL391840.1-201ENST00000571144 367 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC008752.3-201ENST00000588113 712 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL161629.2-201ENST00000615347 275 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 CTSLP2-204ENST00000629029 392 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TRIM49D1C9J1S8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.15□□□□□ -2.06
TRIM49D1C9J1S8 MTND5P29-201ENST00000458676 1807 ntBASIC2.15□□□□□ -2.06
TRIM49D1C9J1S8 AL139276.1-201ENST00000311910 1001 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-641P-201ENST00000384006 107 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-198P-201ENST00000384258 104 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-278P-201ENST00000390945 109 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNU6-1197P-201ENST00000391183 107 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNU4-55P-201ENST00000410731 137 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RPL7L1P10-201ENST00000427790 463 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC073464.1-201ENST00000429823 534 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 BNIP3P2-201ENST00000441221 577 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 NEFMP1-201ENST00000443423 1006 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 DPPA3P1-201ENST00000448050 469 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL118520.1-201ENST00000450770 291 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 CECR9-201ENST00000453421 199 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 SNRPFP4-201ENST00000456366 242 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RPS3AP17-201ENST00000472594 777 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 SNORA31.3-201ENST00000516029 96 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 RN7SKP258-201ENST00000517151 304 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC093012.1-202ENST00000549403 582 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC087883.1-201ENST00000551882 391 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC124947.2-202ENST00000552735 133 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC010546.1-201ENST00000569391 485 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC002545.1-201ENST00000592511 181 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC098826.3-201ENST00000603823 466 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL161798.1-201ENST00000604630 131 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AL121917.1-203ENST00000605534 577 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC012557.2-201ENST00000605919 418 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AP002826.1-201ENST00000608835 315 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 MIR6895-201ENST00000613497 78 ntBASIC2.15□□□□□ -2.07
TRIM49D1C9J1S8 AC015540.1-201ENST00000615828 501 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms