Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CGB1A6NKQ9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.23□□□□□ -1.89
CGB1A6NKQ9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CGB1A6NKQ9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC018555.1-201ENST00000567548 1980 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 MIR578-201ENST00000384828 96 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 PTMAP5-201ENST00000393073 333 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RPS4XP3-201ENST00000398541 413 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC245028.1-201ENST00000423259 256 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AL356535.1-201ENST00000440335 398 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RPS3AP46-201ENST00000448352 682 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC084357.1-201ENST00000473404 255 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RPS20P22-201ENST00000473700 357 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 MTND1P19-201ENST00000511780 315 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 MIR4277-201ENST00000578298 84 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RN7SL600P-201ENST00000581811 299 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 MIR3138-201ENST00000585238 82 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RAC1P9-201ENST00000604990 392 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AC098479.1-201ENST00000609225 154 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 AL391261.4-201ENST00000616012 481 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 FP236240.3-201ENST00000623061 327 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 ZNF72P-201ENST00000425869 1908 ntBASIC3.22□□□□□ -1.89
CGB1A6NKQ9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.22□□□□□ -1.89
CGB1A6NKQ9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CGB1A6NKQ9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 MIR383-201ENST00000362257 73 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.64-201ENST00000362845 102 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 SNORD35B-201ENST00000363660 87 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RNU6-770P-201ENST00000363929 105 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RNY3P11-201ENST00000364153 102 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.478-201ENST00000384358 107 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RNU6-1093P-201ENST00000391194 107 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 SAR1AP2-201ENST00000392696 594 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RNU6-325P-201ENST00000411132 105 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 MTCO3P19-201ENST00000415864 321 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL353621.1-201ENST00000418219 243 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 OR2AQ1P-201ENST00000451972 200 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RN7SL604P-201ENST00000492589 296 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RPL29P14-201ENST00000495837 428 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC113155.1-201ENST00000511141 769 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RNU6-911P-201ENST00000516523 104 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 HMGB1P14-201ENST00000557424 591 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL512605.2-201ENST00000592972 256 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 RPS29P30-201ENST00000600975 111 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL390123.1-201ENST00000603216 237 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC008962.1-201ENST00000605729 304 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC096772.1-201ENST00000609146 564 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC034102.8-201ENST00000615146 484 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AL159153.1-201ENST00000619688 317 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 MIR4727-201ENST00000622232 55 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC027309.3-201ENST00000623419 351 ntBASIC3.21□□□□□ -1.9
CGB1A6NKQ9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.21□□□□□ -1.9
CGB1A6NKQ9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms