Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 SNORD3E-201ENST00000362899 217 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-960P-201ENST00000364056 120 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 Y_RNA.381-201ENST00000365666 102 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 MIR558-201ENST00000384920 94 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC068050.1-201ENST00000394891 380 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 BTF3L4P1-201ENST00000413813 468 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 HMGN2P30-201ENST00000423237 256 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 Z98742.2-201ENST00000431564 187 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AL591212.2-201ENST00000433923 257 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC073614.1-201ENST00000438690 650 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 Z83846.1-201ENST00000446798 265 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RPL37P25-201ENST00000507308 276 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-123P-201ENST00000516163 102 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNA5SP200-201ENST00000516360 103 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU2-10P-201ENST00000516375 211 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU7-51P-201ENST00000516560 62 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 Vault.3-201ENST00000516676 95 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-914P-201ENST00000516749 109 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-430P-201ENST00000517078 107 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 DNAJC8P1-201ENST00000554535 372 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 HMGB1P14-201ENST00000557424 591 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC025678.1-201ENST00000567861 338 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 DEFB131E-202ENST00000602581 683 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AL158032.1-201ENST00000605401 106 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC080013.6-201ENST00000606185 215 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 MIR98-201ENST00000606724 119 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC126118.1-201ENST00000607744 628 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC099842.1-201ENST00000619919 596 ntBASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV40A0A0B4J280 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 HSPE1P11-201ENST00000339579 310 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-181P-201ENST00000363225 107 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-61P-201ENST00000365528 109 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-74P-201ENST00000384235 107 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 CISD1P1-201ENST00000393907 327 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 GSTA9P-201ENST00000406231 611 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 BX682237.1-201ENST00000415016 335 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 CDK8P2-201ENST00000415020 547 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 OR51A5P-201ENST00000415429 942 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 BPY2DP-201ENST00000422208 265 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC000111.3-201ENST00000433478 193 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 HMGN2P3-201ENST00000433603 273 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 HMGN2P5-201ENST00000436882 273 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 KATNBL1P3-201ENST00000443475 909 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL031659.1-201ENST00000447075 539 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 FABP5P13-201ENST00000452144 328 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RPL31P3-201ENST00000458430 332 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 SNORD97-201ENST00000459187 142 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 snoU109.1-201ENST00000459339 135 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RPS29P12-201ENST00000460178 152 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RPL39P36-201ENST00000490784 156 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC108078.2-201ENST00000510750 236 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 MRPS36P2-201ENST00000512569 299 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNA5SP82-201ENST00000516707 92 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNU6-445P-201ENST00000516949 107 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 RNA5SP291-201ENST00000517222 105 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC025755.1-201ENST00000521306 278 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC087883.1-201ENST00000551882 391 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 MYL12BP1-201ENST00000569826 507 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 MIR3611-201ENST00000584484 83 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL022154.1-201ENST00000604698 785 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 Z84480.1-201ENST00000605131 311 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AC103591.3-201ENST00000608684 209 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL161734.1-201ENST00000609720 557 ntBASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV40A0A0B4J280 AL512643.1-201ENST00000635735 524 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms