Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 AL359273.1-201ENST00000510918 627 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC107393.1-201ENST00000512403 346 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 RNU6-927P-201ENST00000516199 100 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 SNORA31.6-201ENST00000516241 130 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.674-201ENST00000516362 113 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AL157871.3-201ENST00000557231 293 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC007448.1-201ENST00000582714 234 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 MIR8076-201ENST00000611401 83 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC004852.3-201ENST00000614131 326 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
COX11Q9Y6N1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COX11Q9Y6N1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 RNU6-1159P-201ENST00000362933 107 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.83-201ENST00000363005 113 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 U3.13-201ENST00000364804 214 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 RNU6-125P-201ENST00000384505 107 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.541-201ENST00000384640 113 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 MIR190B-201ENST00000401119 79 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 SNORA3C-201ENST00000408792 125 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.602-201ENST00000410535 92 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 RN7SKP100-201ENST00000411258 284 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL138785.1-201ENST00000425821 331 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC083863.1-201ENST00000438811 231 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 HIGD1AP2-201ENST00000446367 280 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 U8.22-201ENST00000459141 133 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 U8.21-201ENST00000459536 136 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC034236.1-201ENST00000469891 373 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL049874.1-201ENST00000489560 388 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 SERF1AP1-201ENST00000514575 187 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 RN7SKP276-201ENST00000516242 268 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL590705.4-201ENST00000532209 134 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 MIR5699-201ENST00000578903 90 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 MIR4270-201ENST00000581799 70 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC098826.3-201ENST00000603823 466 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC006077.1-201ENST00000604746 343 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC073657.2-201ENST00000605661 303 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AC009318.2-201ENST00000610917 651 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL353748.2-201ENST00000622148 471 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 MFSD8-216ENST00000641147 4009 ntBASIC3.19□□□□□ -1.9
COX11Q9Y6N1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COX11Q9Y6N1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 HAUS6P2-201ENST00000433254 2404 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RNU1-18P-201ENST00000363062 164 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RNA5SP87-201ENST00000384155 118 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.464-201ENST00000384282 110 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.506-201ENST00000384494 102 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 MIR153-1-201ENST00000384914 90 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 MIR301A-201ENST00000385261 86 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL21P75-201ENST00000396599 483 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL21P28-201ENST00000401418 483 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 MRPL35P1-201ENST00000404272 572 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 AL590556.1-201ENST00000423231 483 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL29P29-201ENST00000448725 423 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COX11Q9Y6N1 AC079354.2-201ENST00000453523 154 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL21P11-201ENST00000461458 483 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RN7SL93P-201ENST00000463035 293 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL21P39-201ENST00000463605 483 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL7P49-201ENST00000471402 708 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RPL23AP45-201ENST00000476406 468 ntBASIC3.18□□□□□ -1.9
COX11Q9Y6N1 RN7SL826P-201ENST00000479724 288 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms