Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MTCO3P46-201ENST00000425787 232 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 ARF4P2-201ENST00000430209 526 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 IFNA20P-201ENST00000436840 528 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 RN7SKP256-201ENST00000517201 314 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC005498.1-201ENST00000592125 465 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC092747.3-201ENST00000603769 301 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AL591516.1-201ENST00000611326 274 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AL136360.1-201ENST00000503377 1900 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.11-201ENST00000362375 109 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RNU6-82P-201ENST00000363970 107 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RNU6-434P-201ENST00000384376 107 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.530-201ENST00000384587 101 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 MIR504-201ENST00000385065 83 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AL160275.3-201ENST00000423876 471 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 HMGB3P8-201ENST00000449709 577 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RPL31P60-201ENST00000478450 367 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RNU4-49P-201ENST00000516080 140 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RNU7-30P-201ENST00000516835 62 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 OR5D17P-201ENST00000531492 978 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 RAB11AP2-201ENST00000545905 639 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 VN1R80P-201ENST00000597126 338 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC106900.2-201ENST00000604994 317 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 MIR15A-201ENST00000607334 83 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AL512643.1-201ENST00000635735 524 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 AC008568.2-201ENST00000623862 2313 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RAI2Q9Y5P3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.61-201ENST00000362835 102 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1167P-201ENST00000363227 94 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 SNORD81.2-201ENST00000365153 76 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-393P-201ENST00000384475 107 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP219-201ENST00000390940 113 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 SNORD70.1-201ENST00000391007 85 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP247-201ENST00000411181 105 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP508-201ENST00000411327 119 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 POLHP1-201ENST00000411806 470 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 MTND3P8-201ENST00000412909 339 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 NCOR1P3-201ENST00000420479 303 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AC003685.2-201ENST00000422795 395 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 NDUFB4P7-201ENST00000423198 363 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 RPS15AP27-201ENST00000449183 343 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 PPP1R2P5-201ENST00000457256 603 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 CEACAMP4-201ENST00000457676 421 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AC083904.1-201ENST00000487828 231 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.16□□□□□ -1.9
RAI2Q9Y5P3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms