Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL391646.1-201ENST00000603860 190 ntBASIC0.48□□□□□ -2.33
AP4S1Q9Y587 AL022345.1-201ENST00000607292 135 ntBASIC0.48□□□□□ -2.33
AP4S1Q9Y587 AF129408.1-201ENST00000608767 431 ntBASIC0.48□□□□□ -2.33
AP4S1Q9Y587 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.48□□□□□ -2.33
AP4S1Q9Y587 HAUS6P2-201ENST00000433254 2404 ntBASIC0.48□□□□□ -2.33
AP4S1Q9Y587 AC092125.1-201ENST00000562568 1995 ntBASIC0.48□□□□□ -2.33
AP4S1Q9Y587 RNA5SP99-201ENST00000364020 114 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.47□□□□□ -2.33
AP4S1Q9Y587 CALM1P1-201ENST00000442082 433 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.47□□□□□ -2.33
AP4S1Q9Y587 RNU6-197P-201ENST00000516680 100 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 RNA5SP291-201ENST00000517222 105 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 AP000889.1-201ENST00000530968 660 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.47□□□□□ -2.33
AP4S1Q9Y587 RN7SL622P-201ENST00000585292 275 ntBASIC0.47□□□□□ -2.33
AP4S1Q9Y587 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 SNORA25-201ENST00000384384 134 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC083875.1-201ENST00000419509 405 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 NCOR1P3-201ENST00000420479 303 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC244505.5-201ENST00000443639 207 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AL035666.1-201ENST00000446195 348 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 RPL21P47-201ENST00000483696 477 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 NACAP3-201ENST00000552100 481 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC233266.2-201ENST00000567067 528 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 ADAM3B-201ENST00000569937 840 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 MIR3937-201ENST00000580135 106 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.46□□□□□ -2.34
AP4S1Q9Y587 snoU13.31-201ENST00000607291 104 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC040896.1-201ENST00000613819 479 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 MIR8065-201ENST00000620577 100 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AL133216.2-202ENST00000634512 349 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 AC009541.1-201ENST00000438279 2662 ntBASIC0.46□□□□□ -2.34
AP4S1Q9Y587 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 RNU6-778P-201ENST00000363269 103 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 RNU6-1032P-201ENST00000384100 107 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 SNORD14D-201ENST00000384390 87 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 USP9YP19-201ENST00000412165 485 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 USP9YP13-201ENST00000417797 480 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 SNRPEP7-201ENST00000438350 220 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 HMGN1P7-201ENST00000491722 313 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC018618.2-201ENST00000604770 446 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AP000860.1-201ENST00000605250 559 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AL022345.2-201ENST00000606307 135 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC004067.1-201ENST00000608733 700 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AC009033.1-201ENST00000624279 431 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 OR4G3P-201ENST00000633500 913 ntBASIC0.45□□□□□ -2.34
AP4S1Q9Y587 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.45□□□□□ -2.34
AP4S1Q9Y587 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
AP4S1Q9Y587 RNU6-414P-201ENST00000363705 104 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC127391.1-201ENST00000411737 98 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 EIF1P1-201ENST00000421436 341 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC245102.2-201ENST00000448956 180 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 HSPE1P13-201ENST00000451143 297 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC087477.1-201ENST00000465747 340 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC011604.1-201ENST00000545978 196 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC133485.1-201ENST00000567176 124 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC138907.6-201ENST00000568401 126 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AC107075.1-201ENST00000613695 314 ntBASIC0.44□□□□□ -2.34
AP4S1Q9Y587 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
AP4S1Q9Y587 AL161781.1-201ENST00000354277 403 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 MIR608-201ENST00000384820 100 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 RN7SKP284-201ENST00000411002 343 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 RPL31P54-201ENST00000429803 370 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL592045.1-201ENST00000429867 352 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 PTGES3P1-201ENST00000439531 483 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC092685.1-201ENST00000447960 1243 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC104058.1-201ENST00000448028 297 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 PRELID3BP1-201ENST00000457142 540 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 TOMM22P6-201ENST00000465035 409 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms