Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC108479.2-201ENST00000617314 601 ntBASIC1.75□□□□□ -2.13
RHBDD3Q9Y3P4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.75□□□□□ -2.13
RHBDD3Q9Y3P4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.75□□□□□ -2.13
RHBDD3Q9Y3P4 AC010149.2-201ENST00000637608 315 ntBASIC1.75□□□□□ -2.13
RHBDD3Q9Y3P4 MIR3529-201ENST00000637713 78 ntBASIC1.75□□□□□ -2.13
RHBDD3Q9Y3P4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-487P-201ENST00000365430 104 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 SNORA8-201ENST00000384574 139 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 RNA5SP425-201ENST00000410336 112 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AC096638.1-201ENST00000444678 216 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AL353705.4-201ENST00000449661 238 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 MTND1P3-201ENST00000484956 952 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AP004247.1-201ENST00000531556 1289 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AL157871.3-201ENST00000557231 293 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 MIR1273C-201ENST00000578669 77 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 MIR544B-201ENST00000582372 78 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 RPL30P11-203ENST00000598995 310 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 VN1R82P-201ENST00000601481 356 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 AC073410.2-201ENST00000603240 332 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 BNIP3P31-201ENST00000604515 566 ntBASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
RHBDD3Q9Y3P4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNU4-92P-201ENST00000363783 136 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-166P-201ENST00000384371 107 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNA5SP465-201ENST00000391195 109 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC119751.3-201ENST00000399720 670 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AL591034.2-201ENST00000402839 359 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNU2-2P-201ENST00000410396 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RN7SKP223-201ENST00000410582 62 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNA5SP489-201ENST00000410986 109 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 DPH3P2-201ENST00000422618 250 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AL139415.2-201ENST00000431968 163 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AL591212.2-201ENST00000433923 257 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AL117351.1-201ENST00000438864 766 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC012308.1-201ENST00000451232 178 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 HMGB3P17-201ENST00000504195 649 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 BCRP9-201ENST00000605312 388 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 NDUFA8P1-201ENST00000605525 367 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC098614.4-201ENST00000607601 462 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.15-201ENST00000611544 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.16-201ENST00000613119 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.12-201ENST00000613778 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.20-201ENST00000613956 192 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.9-201ENST00000615427 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.11-201ENST00000616345 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.2-201ENST00000616535 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.3-201ENST00000617785 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.19-201ENST00000618602 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 RNU2-1-201ENST00000618664 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.6-201ENST00000619225 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.5-201ENST00000619465 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 U2.10-201ENST00000620268 191 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 YWHAEP7-203ENST00000622054 312 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 DUXAP9-208ENST00000622815 614 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 AC092656.1-203ENST00000624134 423 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 MIR219B-201ENST00000637023 88 ntBASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
RHBDD3Q9Y3P4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 RNU1-23P-201ENST00000363361 144 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-395P-201ENST00000365662 106 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AL133475.1-201ENST00000404414 305 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 FTH1P15-201ENST00000406984 280 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 RNU6-1025P-201ENST00000410629 104 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 EIF4EP2-201ENST00000422816 654 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 RPS3AP22-201ENST00000488297 769 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC109927.2-201ENST00000506416 303 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 MTND4P2-201ENST00000507767 1203 ntBASIC1.72□□□□□ -2.13
RHBDD3Q9Y3P4 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms