Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
KCNIP3Q9Y2W7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 OR56A5-201ENST00000340110 738 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 Y_RNA.22-201ENST00000362492 102 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 SNORD3E-201ENST00000362899 217 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-553P-201ENST00000364047 96 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 MIR95-201ENST00000385072 81 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 SNORA46.1-201ENST00000391069 153 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL133475.1-201ENST00000404414 305 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 Y_RNA.598-201ENST00000410480 95 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU2-39P-201ENST00000410604 198 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU2-8P-201ENST00000410727 190 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU2-63P-201ENST00000410792 194 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC127391.1-201ENST00000411737 98 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL031779.1-201ENST00000415663 330 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC114491.1-201ENST00000416095 246 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 NPM1P11-201ENST00000417106 855 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL627311.1-201ENST00000431514 115 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 KATNBL1P6-201ENST00000453433 915 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU7-125P-201ENST00000458760 62 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 BZW1P2-201ENST00000473537 826 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNA5SP24-201ENST00000516478 95 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC022616.3-201ENST00000523940 148 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 ADI1P3-201ENST00000549509 470 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC136619.2-201ENST00000563361 631 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC009977.1-201ENST00000586015 570 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 ELOCP29-201ENST00000588193 334 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC012065.4-201ENST00000602445 679 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL138889.2-201ENST00000603883 242 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC068276.1-201ENST00000605793 379 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC091304.9-201ENST00000612091 226 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 MIR5739-201ENST00000619803 80 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AC006020.1-201ENST00000420179 1854 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 MTND4P4-201ENST00000439033 1366 ntBASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.94□□□□□ -2.1
KCNIP3Q9Y2W7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 SNORD14B-201ENST00000364533 90 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 RPS3AP36-201ENST00000398190 775 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AL359511.1-201ENST00000402970 211 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AL031577.2-201ENST00000404133 280 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 EIF4EP4-201ENST00000424916 578 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 HIGD1AP2-201ENST00000446367 280 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 SNRPFP4-201ENST00000456366 242 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 MED28P2-201ENST00000475771 317 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 RAP1BP2-201ENST00000478270 544 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC117522.1-201ENST00000509821 380 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC118465.1-201ENST00000513820 1271 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-123P-201ENST00000516163 102 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC027176.1-201ENST00000560204 514 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC025678.1-201ENST00000567861 338 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 MIR4325-201ENST00000583049 90 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 MIR548AC-201ENST00000585049 88 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 MIR1291-201ENST00000627649 87 ntBASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
KCNIP3Q9Y2W7 AC069528.2-201ENST00000624849 1991 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 GNG5P1-201ENST00000255500 204 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-942P-201ENST00000363002 107 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 Y_RNA.126-201ENST00000363382 111 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 RNA5SP240-201ENST00000365355 128 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-72P-201ENST00000384285 79 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 SNORA24.1-201ENST00000384401 135 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 Y_RNA.560-201ENST00000384689 102 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 CISD1P1-201ENST00000393907 327 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL445529.1-201ENST00000398713 389 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL139039.1-201ENST00000401900 692 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL591416.1-201ENST00000404015 867 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC105272.1-201ENST00000438604 198 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms