Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC007179.3-201ENST00000604976 235 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC005046.1-201ENST00000608515 625 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC004925.1-201ENST00000624256 2706 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC107068.1-201ENST00000563286 4218 ntBASIC5.4□□□□□ -1.54
ZC3H4Q9UPT8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ZC3H4Q9UPT8 MIR331-201ENST00000362302 94 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AL445584.1-201ENST00000431451 330 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 snoU109.2-201ENST00000459316 135 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AL160314.1-201ENST00000490836 438 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 MRPS36P4-201ENST00000534436 298 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AC233981.2-201ENST00000611524 1614 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 AL359854.1-201ENST00000614203 1594 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 MIR8069-1-201ENST00000616627 86 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 MIR8069-2-201ENST00000621412 86 ntBASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZC3H4Q9UPT8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 Y_RNA.170-201ENST00000363746 110 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-879P-201ENST00000364328 108 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 SNORA7.2-201ENST00000364446 145 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-336P-201ENST00000364891 107 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RNA5SP235-201ENST00000365411 114 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-47P-201ENST00000383866 107 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-843P-201ENST00000384454 104 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 HMGN2P21-201ENST00000447764 270 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC013470.1-201ENST00000453438 462 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 snoU13.30-201ENST00000458951 104 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RPS29P26-201ENST00000477483 171 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC078817.1-201ENST00000492623 435 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AL592156.1-201ENST00000508758 304 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 Y_RNA.679-201ENST00000516416 91 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 ATP5F1P5-201ENST00000526403 760 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AC060766.3-201ENST00000591442 263 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AL162424.1-201ENST00000602325 221 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AL078605.1-201ENST00000603529 500 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 MZT1P2-201ENST00000604387 248 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 FAM27D1-201ENST00000612308 341 ntBASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ZC3H4Q9UPT8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 Z95331.1-201ENST00000623075 23112 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AL136164.3-201ENST00000624429 3978 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AC009541.1-201ENST00000438279 2662 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 RNU4-9P-201ENST00000364951 139 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 RPL23AP52-201ENST00000439311 478 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AC139453.3-201ENST00000493276 369 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AC005921.1-201ENST00000510589 286 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 SNORD116-28-201ENST00000516123 91 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-346P-201ENST00000516288 111 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 RNU6-572P-201ENST00000516724 80 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 AL133243.3-201ENST00000617415 3004 ntBASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZC3H4Q9UPT8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 RNA5SP130-201ENST00000364431 114 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 Y_RNA.292-201ENST00000364904 97 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 UBA52P6-201ENST00000399822 382 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 Y_RNA.590-201ENST00000410140 107 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 RNU4-30P-201ENST00000410245 143 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 AL358453.1-201ENST00000422522 250 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 AL500522.2-201ENST00000448562 343 ntBASIC5.37□□□□□ -1.55
ZC3H4Q9UPT8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms