Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TRIM35Q9UPQ4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 AC010329.2-201ENST00000595195 2737 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-712P-201ENST00000410558 100 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 AC114755.2-201ENST00000413520 361 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 RPL23AP95-201ENST00000426806 265 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 AP003730.1-201ENST00000524605 285 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 MIR4724-201ENST00000579485 89 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 AC009831.4-201ENST00000620744 325 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 MTND5P18-201ENST00000445624 1801 ntBASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.31□□□□□ -1.4
TRIM35Q9UPQ4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 Y_RNA.221-201ENST00000364248 96 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 SNORD32A-201ENST00000364805 84 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 AC074117.2-201ENST00000417130 397 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 AC091868.1-201ENST00000508746 304 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-572P-201ENST00000516724 80 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 PRELID2P1-201ENST00000552837 301 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 MIR378D2-201ENST00000580636 98 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 FAM27B-201ENST00000610601 213 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 AC100827.5-201ENST00000615883 426 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM35Q9UPQ4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 Y_RNA.85-201ENST00000363014 111 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-1336P-201ENST00000383886 109 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 Y_RNA.544-201ENST00000384650 113 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 RNY1P7-201ENST00000384743 110 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 MIR585-201ENST00000384887 94 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-710P-201ENST00000410424 105 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AC090602.1-201ENST00000469695 252 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 UBE2CP3-201ENST00000502715 450 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 RN7SKP276-201ENST00000516242 268 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 SNORA74C-1-201ENST00000580726 201 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AL356157.2-201ENST00000605122 111 ntBASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM35Q9UPQ4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-793P-201ENST00000384233 104 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RNU6-1245P-201ENST00000411130 106 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RPL17P36-201ENST00000420302 549 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 FTH1P6-201ENST00000430768 320 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AL590399.6-201ENST00000446396 307 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 HSPE1P6-201ENST00000479457 291 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RNA5SP395-201ENST00000516567 118 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AC091042.1-201ENST00000579213 173 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 RPL30P11-203ENST00000598995 310 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM35Q9UPQ4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
TRIM35Q9UPQ4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.27□□□□□ -1.4
TRIM35Q9UPQ4 MIR367-201ENST00000362299 68 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms