Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC107393.1-201ENST00000512403 346 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 SERF1AP1-201ENST00000514575 187 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 SNORA25.14-201ENST00000516481 132 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 CASP1P1-201ENST00000526345 212 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 MIR4277-201ENST00000578298 84 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 SNORD84-203ENST00000584275 78 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AC240442.1-201ENST00000616055 283 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AC099669.2-201ENST00000616549 437 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AC090617.7-201ENST00000623952 126 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 MIR6715B-201ENST00000637172 77 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 AC007785.2-201ENST00000598627 1916 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 NOL8P1-201ENST00000508336 3529 ntBASIC4.42□□□□□ -1.7
AP4E1Q9UPM8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNU1-108P-201ENST00000362556 161 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNU6-1159P-201ENST00000362933 107 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNA5SP443-201ENST00000363083 132 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.123-201ENST00000363338 102 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNU6-682P-201ENST00000363843 106 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.199-201ENST00000364014 102 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNU2-20P-201ENST00000410425 191 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.602-201ENST00000410535 92 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 HLA-N-201ENST00000437516 135 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 HSPE1P25-201ENST00000455484 251 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC093840.1-201ENST00000511599 336 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNA5SP49-201ENST00000516450 115 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNA5SP519-201ENST00000516480 119 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 RNA5SP73-201ENST00000516744 108 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AP002392.1-201ENST00000537692 208 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 FAM60BP-201ENST00000578364 658 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC060766.3-201ENST00000591442 263 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AL645944.1-201ENST00000603857 493 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC073657.2-201ENST00000605661 303 ntBASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.41□□□□□ -1.7
AP4E1Q9UPM8 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AP4E1Q9UPM8 Y_RNA.76-201ENST00000362931 109 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RNU1-32P-201ENST00000363937 159 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RNU6-290P-201ENST00000365212 101 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RNU6-937P-201ENST00000384325 106 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RNU6-166P-201ENST00000384371 107 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 SNORD78.2-201ENST00000391076 69 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RNU6-1140P-201ENST00000410517 106 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC017079.2-201ENST00000416102 485 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AL591043.1-201ENST00000432461 424 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RPL7P49-201ENST00000471402 708 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 RPS29P19-201ENST00000479709 171 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AP006245.1-201ENST00000522549 120 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC024405.2-202ENST00000532731 184 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC023824.2-201ENST00000566185 400 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 CYP4A43P-201ENST00000568156 121 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC090617.3-201ENST00000573670 475 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 FAM27D1-201ENST00000612308 341 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AL023881.1-201ENST00000621088 301 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 AC132825.6-201ENST00000638861 357 ntBASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
AP4E1Q9UPM8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms