Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC068587.5-201ENST00000528506 175 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC091544.4-201ENST00000555268 342 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC006600.1-201ENST00000572529 153 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC123786.2-201ENST00000603459 275 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-156P-201ENST00000621869 107 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AL365361.1-201ENST00000566942 3481 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.167-201ENST00000363735 109 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.378-201ENST00000365652 113 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.518-201ENST00000384552 113 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 SNORA22C-201ENST00000384614 134 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 MYL8P-204ENST00000431574 518 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 MTATP6P16-201ENST00000434543 526 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU7-59P-201ENST00000459101 61 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 FCF1P8-201ENST00000510322 597 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-62P-201ENST00000516526 102 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AP006587.4-201ENST00000526053 529 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC009229.3-201ENST00000608056 282 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AP003355.3-201ENST00000623465 114 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 MIR448-201ENST00000362131 111 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 SNORD113-7-201ENST00000363762 77 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 SNORD14.1-201ENST00000365609 90 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 MIR548H3-201ENST00000408771 118 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 RNU2-15P-201ENST00000410692 191 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 RAC1P7-201ENST00000445367 377 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.644-201ENST00000459006 113 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 snoU13.7-201ENST00000459220 104 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 TRBV12-2-201ENST00000489763 344 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 BTF3L4P4-201ENST00000506381 449 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 AC074198.2-201ENST00000508153 258 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.674-201ENST00000516362 113 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 SNORA25.14-201ENST00000516481 132 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 RN7SKP82-201ENST00000516786 223 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 RNA5SP503-201ENST00000517047 117 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 AC109329.1-201ENST00000518744 317 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 GTF3AP2-201ENST00000557014 266 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 AC011921.3-201ENST00000605540 361 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 HMGB1P50-201ENST00000605814 607 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 Z82243.1-201ENST00000609432 473 ntBASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.19□□□□□ -1.58
COL17A1Q9UMD9 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AL109809.4-201ENST00000603520 2185 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC007656.2-201ENST00000624902 4547 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RNY1-201ENST00000364228 113 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RNY1P5-201ENST00000383890 115 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC108938.1-201ENST00000451204 136 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RPS23P3-201ENST00000470993 430 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC022493.2-201ENST00000506122 481 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC008885.1-201ENST00000514930 301 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RNU6-189P-201ENST00000516120 101 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RN7SKP219-201ENST00000516825 296 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC092470.1-201ENST00000546187 132 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC128657.1-201ENST00000549459 145 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 AC007390.2-201ENST00000606229 3803 ntBASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL17A1Q9UMD9 PABPC1P7-201ENST00000413177 1513 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 AC018555.1-201ENST00000567548 1980 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 USP8P1-201ENST00000494673 3183 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 AL445437.1-201ENST00000623157 3087 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.19-201ENST00000362462 99 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.39-201ENST00000362620 98 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.43-201ENST00000362670 111 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.200-201ENST00000364018 102 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 SNORA62.1-201ENST00000364287 154 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 RNVU1-3-201ENST00000364313 161 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 SNORD116-11-201ENST00000383882 92 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 RNU6-39P-201ENST00000384344 107 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 RNU6-328P-201ENST00000390887 106 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 EIF4E2P1-201ENST00000393781 255 ntBASIC5.17□□□□□ -1.58
COL17A1Q9UMD9 RPL21P109-201ENST00000422213 475 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms