Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 SKA2P1-201ENST00000425592 390 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 MTND2P22-201ENST00000444325 1033 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 RN7SL283P-201ENST00000489055 303 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 AC139453.3-201ENST00000493276 369 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 PIGPP4-201ENST00000584447 307 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 AC020895.1-201ENST00000595362 272 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 RN7SKP299-201ENST00000606679 301 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 MIR15A-201ENST00000607334 83 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 AC109347.2-201ENST00000610220 349 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 MTND5P6-201ENST00000422338 1798 ntBASIC4.59□□□□□ -1.67
SHROOM4Q9ULL8 AL353729.1-201ENST00000425044 720 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 RPS15AP5-201ENST00000436276 388 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AL353706.1-201ENST00000436728 494 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AC093534.1-201ENST00000504977 132 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AC090572.1-201ENST00000519251 160 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 OR5B19P-201ENST00000531766 928 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 MIR4528-201ENST00000577763 90 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AL158032.1-201ENST00000605401 106 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 U6.99-201ENST00000637524 83 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AL390237.1-201ENST00000404226 1415 ntBASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-1097P-201ENST00000363586 107 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 Y_RNA.553-201ENST00000384670 102 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AL360221.1-201ENST00000445989 335 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RPL23AP42-201ENST00000471152 471 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RPL31P41-201ENST00000477967 372 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RPS27AP10-201ENST00000496103 208 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AC010424.1-201ENST00000506336 297 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AC109927.2-201ENST00000506416 303 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RNA5SP76-201ENST00000516277 87 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-914P-201ENST00000516749 109 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 AC007151.1-201ENST00000572774 483 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHROOM4Q9ULL8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC093010.3-201ENST00000570269 15214 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-1159P-201ENST00000362933 107 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC023141.4-201ENST00000412031 328 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 GPR143P-201ENST00000434155 205 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 MTCO2P16-201ENST00000436962 677 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 RPL9P33-201ENST00000484311 566 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC009901.1-201ENST00000506703 541 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC113155.1-201ENST00000511141 769 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-410P-201ENST00000517006 107 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC006362.1-201ENST00000567392 174 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 NBR2-204ENST00000587322 63 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC009318.2-201ENST00000610917 651 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-190P-201ENST00000384154 102 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 Y_RNA.534-201ENST00000384599 112 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-658P-201ENST00000384606 106 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 SNORA64-201ENST00000384674 134 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AL162578.1-201ENST00000406202 378 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 GTF2IP20-201ENST00000431663 360 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 TRBV1-201ENST00000476502 284 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC105252.1-201ENST00000503089 286 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC116562.3-201ENST00000506136 177 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC108078.2-201ENST00000510750 236 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC025755.1-201ENST00000521306 278 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AP003072.2-201ENST00000527756 676 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC068587.5-201ENST00000528506 175 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 SNRPGP18-201ENST00000553000 214 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms