Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR597-201ENST00000384968 97 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL079342.2-201ENST00000403367 482 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 MTCO2P20-201ENST00000437339 673 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 MTCYBP18-201ENST00000501056 747 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC114801.2-201ENST00000503825 781 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 MTCYBP16-201ENST00000509187 1129 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 RN7SKP258-201ENST00000517151 304 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 RNU6-586P-201ENST00000517265 104 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL160236.1-201ENST00000556317 195 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 MTATP6P25-201ENST00000574491 261 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 RNU6-91P-201ENST00000607774 107 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS29Q9UBQ0 AC138393.1-203ENST00000327086 343 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNU6-457P-201ENST00000363999 107 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNU11-3P-201ENST00000391111 133 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RPL21P24-201ENST00000413752 448 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 MTCO3P46-201ENST00000425787 232 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RSL24D1P8-201ENST00000434442 492 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC245102.2-201ENST00000448956 180 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 MTND1P31-201ENST00000449206 961 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 HSPE1P24-201ENST00000450782 238 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC104563.1-201ENST00000476147 376 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNU6-1225P-201ENST00000516336 65 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 RNU1-92P-201ENST00000517017 135 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AP005660.1-201ENST00000522972 293 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AP003033.1-201ENST00000527244 415 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC023538.1-201ENST00000534576 736 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC093012.1-202ENST00000549403 582 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC098483.2-201ENST00000603158 454 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC006338.1-201ENST00000618453 749 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC013470.4-201ENST00000619978 986 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AL079343.1-201ENST00000572358 1771 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 AC092447.10-201ENST00000620607 1652 ntBASIC1.26□□□□□ -2.21
VPS29Q9UBQ0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 RNA5SP213-201ENST00000391031 106 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 MIR1262-201ENST00000408276 93 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC104651.1-201ENST00000427559 735 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 MTND5P14-201ENST00000441481 1267 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC118469.1-201ENST00000442943 488 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AL353718.1-201ENST00000451028 517 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 RPL18AP17-201ENST00000455326 198 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC023194.1-201ENST00000493084 308 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC093801.2-201ENST00000503966 1050 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC117532.1-201ENST00000514638 323 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AP000763.2-201ENST00000540641 163 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC135279.1-201ENST00000543493 504 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 RPL30P11-203ENST00000598995 310 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC021755.4-201ENST00000616620 456 ntBASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS29Q9UBQ0 U8.10-201ENST00000384260 133 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 SNORD14D-201ENST00000384390 87 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 MIR764-201ENST00000390811 85 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 MTCYBP43-201ENST00000513621 740 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 RNU5B-3P-201ENST00000516601 115 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms