Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL353678.1-201ENST00000422735 741 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL161651.1-201ENST00000440882 223 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 HMGN2P26-201ENST00000463169 339 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC113155.1-201ENST00000511141 769 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 RNU6-1038P-201ENST00000516516 104 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 CYCSP27-201ENST00000527643 293 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC007458.1-201ENST00000542812 373 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL121821.2-201ENST00000556081 394 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL020991.1-201ENST00000612314 373 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL355365.1-201ENST00000616480 294 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 U4.6-201ENST00000621618 127 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL008636.1-201ENST00000625038 1018 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 AL732372.2-225ENST00000642124 456 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN1Q9P244 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 RNU6-266P-201ENST00000364225 107 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 RNA5SP267-201ENST00000364893 126 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 MIR490-201ENST00000384865 128 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 RNA5SP219-201ENST00000390940 113 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 RPL7P10-201ENST00000417407 739 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 DBIP2-201ENST00000419076 262 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 PGBD4P6-201ENST00000421501 610 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 TOMM20P4-201ENST00000427861 435 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 MTCO3P18-201ENST00000440206 761 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC092001.1-201ENST00000453012 261 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 RPS29P12-201ENST00000460178 152 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 RPL21P10-201ENST00000463521 490 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC026784.1-201ENST00000507986 352 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 RNU6-358P-201ENST00000516564 75 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC011611.1-201ENST00000552179 197 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC007151.1-201ENST00000572774 483 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AL391813.1-201ENST00000603098 260 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC092747.3-201ENST00000603769 301 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC091152.3-201ENST00000604227 325 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC002044.1-201ENST00000606707 158 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC010378.1-201ENST00000619270 362 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 DUXAP9-208ENST00000622815 614 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 Z69720.2-201ENST00000624755 279 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 MIR3651-201ENST00000630427 90 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 ZNF519P1-201ENST00000449011 1626 ntBASIC3.26□□□□□ -1.89
LRFN1Q9P244 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LRFN1Q9P244 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.26□□□□□ -1.89
LRFN1Q9P244 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 Y_RNA.111-201ENST00000363248 100 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 Y_RNA.157-201ENST00000363638 102 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC138393.2-201ENST00000414742 246 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 RPL30P16-201ENST00000419341 429 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL139413.1-201ENST00000421309 217 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL358075.3-201ENST00000426289 226 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC097713.2-201ENST00000430199 356 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 RBMY2UP-201ENST00000453474 324 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC233279.1-201ENST00000455300 423 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms