Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 SNORA31-201ENST00000362607 130 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RNU6-99P-201ENST00000364721 107 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RNU6-140P-201ENST00000384566 108 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 MIR521-1-201ENST00000384902 87 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 MIR548F4-201ENST00000408515 105 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RNU2-23P-201ENST00000410545 195 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RNU2-71P-201ENST00000411395 189 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC096644.2-201ENST00000429278 159 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC087650.1-201ENST00000431445 468 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL512844.2-201ENST00000433990 593 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 SNRPEP4-201ENST00000435815 279 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 HMGB1P37-201ENST00000439613 609 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 snoU109.2-201ENST00000459316 135 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC133134.1-201ENST00000466800 359 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RPL17P19-201ENST00000489069 552 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC116655.1-201ENST00000508324 901 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 OR5D17P-201ENST00000531492 978 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 GNAI2P1-201ENST00000541815 315 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 SUB1P3-201ENST00000564581 315 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL606490.9-201ENST00000603331 271 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC104695.3-201ENST00000604052 296 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC018889.1-201ENST00000605372 397 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AL121655.1-201ENST00000605811 308 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC087588.2-201ENST00000617667 426 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC091812.1-201ENST00000432235 1948 ntBASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.39-201ENST00000362620 98 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 RN7SKP280-201ENST00000364196 304 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.389-201ENST00000383924 113 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.455-201ENST00000384230 98 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 MIR568-201ENST00000385036 95 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.645-201ENST00000391229 102 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AL138878.1-201ENST00000405131 347 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 HMGB3P2-201ENST00000411913 584 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AL117339.3-201ENST00000418733 162 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC098614.2-201ENST00000426040 255 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AK3P2-201ENST00000507976 429 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 RNU4-77P-201ENST00000516692 156 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC120057.2-201ENST00000571520 271 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 MIR4503-201ENST00000582187 83 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC004852.3-201ENST00000614131 326 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 uc_338.32-201ENST00000615087 172 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 MIR6500-201ENST00000622700 86 ntBASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KCMF1Q9P0J7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 U8.8-201ENST00000365399 135 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 U3.42-201ENST00000408746 214 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms