Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 Y_RNA.49-201ENST00000362714 112 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 MIR147B-201ENST00000390185 80 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 AC023141.3-201ENST00000436698 278 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 AL356121.1-201ENST00000442911 156 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 AC005868.1-201ENST00000536421 331 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 MIR1245B-201ENST00000636115 69 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXD4L1Q9NU39 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 MIR181A2-201ENST00000384863 110 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 SNORA12-201ENST00000391162 147 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 AL139095.1-201ENST00000404326 391 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 AC138761.5-201ENST00000433967 325 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 RNA5SP20-201ENST00000515976 84 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 RPL23AP91-201ENST00000569211 455 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 AC062037.1-201ENST00000605302 128 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 AC005005.4-201ENST00000623789 16698 ntBASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
FOXD4L1Q9NU39 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 snoU2_19.1-201ENST00000362361 80 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 Z98745.1-201ENST00000402553 494 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 MRPL53P1-201ENST00000414323 319 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 AL772161.1-201ENST00000439130 476 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 RNU5F-4P-201ENST00000516581 114 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 RNU6-63P-201ENST00000516690 95 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 HIGD1AP1-201ENST00000550979 275 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 RNU1-30P-201ENST00000606575 163 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 MIR6823-201ENST00000622118 61 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 AL137141.1-201ENST00000624622 4836 ntBASIC6.9□□□□□ -1.3
FOXD4L1Q9NU39 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
FOXD4L1Q9NU39 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXD4L1Q9NU39 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXD4L1Q9NU39 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
FOXD4L1Q9NU39 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 RN7SKP100-201ENST00000411258 284 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 YME1L1P1-201ENST00000429435 297 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 LINC00328-2P-201ENST00000436585 219 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 RNU7-57P-201ENST00000459540 60 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 RPL39P34-201ENST00000477141 156 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 RPL7AP6-201ENST00000477943 801 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 KRTAP13-6P-201ENST00000508999 371 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 RN7SKP43-201ENST00000516173 320 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 TRAV8-5-201ENST00000537369 341 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 AL365205.2-201ENST00000594586 68 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 AC006115.2-201ENST00000596823 202 ntBASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
FOXD4L1Q9NU39 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AC058791.1-201ENST00000608412 3198 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 RNU6-1014P-201ENST00000383940 103 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 Y_RNA.549-201ENST00000384657 102 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 BX276092.6-201ENST00000430476 250 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 BX276092.8-201ENST00000455722 250 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 SNORD65B-201ENST00000459126 73 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AC092349.1-201ENST00000504903 310 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 snoMBII-202.2-201ENST00000517263 86 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 IGLV3-30-201ENST00000524362 298 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 MIR4662B-201ENST00000579498 81 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 HSPE1P7-201ENST00000604681 321 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AP005432.2-201ENST00000608162 586 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 5S_rRNA.13-201ENST00000622298 123 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 AC005086.4-201ENST00000623065 213 ntBASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
FOXD4L1Q9NU39 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms