Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 Z75746.1-201ENST00000440243 2080 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 ZNF29P-201ENST00000225587 168 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 RPL23AP6-201ENST00000446637 472 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 RPL7P12-201ENST00000446719 750 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AC092436.1-201ENST00000506450 503 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 MTND4P2-201ENST00000507767 1203 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AC012213.3-201ENST00000577199 777 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 MIR4782-201ENST00000577987 79 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AL138963.2-201ENST00000605137 226 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AL589994.2-201ENST00000621124 579 ntBASIC1.79□□□□□ -2.12
TREX1Q9NSU2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.79□□□□□ -2.12
TREX1Q9NSU2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 MTND4P16-201ENST00000466108 1367 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RNU6-906P-201ENST00000384700 70 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RNU6-1176P-201ENST00000390955 107 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 ELOCP17-201ENST00000414751 326 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 EDDM3CP-201ENST00000415977 425 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 ELOCP9-201ENST00000418624 239 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC097463.2-201ENST00000421074 142 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RAC1P6-201ENST00000423911 575 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 TIMM9P1-201ENST00000436122 256 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 LARP1BP3-201ENST00000437229 869 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RPS15AP9-201ENST00000439856 381 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 snoU13.26-201ENST00000459452 105 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC011005.2-201ENST00000487324 359 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RPL39P36-201ENST00000490784 156 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC116655.1-201ENST00000508324 901 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC091965.2-201ENST00000512324 613 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC243960.4-201ENST00000600532 288 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC007363.1-201ENST00000604736 620 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC013470.4-201ENST00000619978 986 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC010608.3-201ENST00000625048 527 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AL512643.1-201ENST00000635735 524 ntBASIC1.78□□□□□ -2.12
TREX1Q9NSU2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
TREX1Q9NSU2 RNU6-188P-201ENST00000364207 107 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 RNA5SP240-201ENST00000365355 128 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 RNU6-14P-201ENST00000384630 106 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AL133475.1-201ENST00000404414 305 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 MIR1302-8-201ENST00000408342 128 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC078974.1-201ENST00000411597 223 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 RPS12P24-201ENST00000412619 387 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.77□□□□□ -2.13
TREX1Q9NSU2 OR51A5P-201ENST00000415429 942 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.77□□□□□ -2.13
TREX1Q9NSU2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
TREX1Q9NSU2 RNU6-953P-201ENST00000459154 107 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC068587.2-201ENST00000478386 781 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 OR5AL2P-201ENST00000532185 920 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AP000873.5-201ENST00000533906 236 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC023050.2-201ENST00000544968 387 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.77□□□□□ -2.13
TREX1Q9NSU2 KC877982.1-201ENST00000602313 470 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AL355297.2-201ENST00000604792 129 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC034229.4-201ENST00000607861 441 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC106052.1-201ENST00000608029 497 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 AC024581.2-201ENST00000619986 252 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 Z99571.1-201ENST00000636677 394 ntBASIC1.77□□□□□ -2.13
TREX1Q9NSU2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RNA5SP276-201ENST00000362580 94 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RNY3P13-201ENST00000365542 102 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RNU6-898P-201ENST00000365627 104 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RNU6-748P-201ENST00000384648 107 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 MTCO2P23-201ENST00000425216 680 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RPL7P54-201ENST00000438336 674 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC009238.1-201ENST00000442165 424 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 BRK1P2-201ENST00000442875 223 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC009237.6-201ENST00000446969 424 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RPL23AP3-201ENST00000453844 468 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 snoU13.15-201ENST00000459407 104 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms