Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 RNU1-33P-201ENST00000364249 162 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-877P-201ENST00000383868 107 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-1027P-201ENST00000383998 107 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 MIR767-201ENST00000390228 109 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AL031121.1-201ENST00000406553 254 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 OR9R1P-201ENST00000412200 877 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 PRPS1P1-201ENST00000445305 876 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 UQCRHP3-201ENST00000451503 251 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 MTND3P16-201ENST00000452205 344 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 MTCO3P38-201ENST00000468910 766 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC011005.2-201ENST00000487324 359 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 RNU1-86P-201ENST00000516108 154 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 RNU1-107P-201ENST00000516617 154 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 LINC00933-203ENST00000559812 219 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC025281.1-201ENST00000567026 265 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 MIR3941-201ENST00000582572 103 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AL451007.1-201ENST00000595491 289 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 U2.17-201ENST00000611454 95 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 MIR6134-201ENST00000617606 109 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC6A13Q9NSD5 ADAM3A-203ENST00000461344 2157 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC093536.2-201ENST00000565257 1406 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC004520.1-201ENST00000608362 1413 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-525P-201ENST00000363685 104 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-82P-201ENST00000363970 107 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 Y_RNA.231-201ENST00000364358 102 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU6-384P-201ENST00000364900 104 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MIR10A-201ENST00000385043 110 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MIR34A-201ENST00000385130 110 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AL357075.1-201ENST00000404107 726 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RPS4XP7-201ENST00000406274 780 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU2-3P-201ENST00000410144 191 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 ARL5AP1-201ENST00000418991 388 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AL159987.2-201ENST00000432754 307 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 BTF3P15-201ENST00000455606 336 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RNU7-167P-201ENST00000459160 62 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 RPL21P99-201ENST00000480369 423 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 FAM92A1P2-202ENST00000504766 877 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 SNORA70.24-201ENST00000517233 118 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 CENPUP1-201ENST00000526649 1202 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC021739.1-201ENST00000559631 174 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC010525.2-201ENST00000590920 195 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 NRBF2P5-201ENST00000603087 788 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MIR7975-201ENST00000619350 68 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AL031601.2-202ENST00000622650 282 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC091953.5-201ENST00000622919 233 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC6A13Q9NSD5 AC073346.2-201ENST00000624724 2058 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 CDC27P3-201ENST00000635418 1910 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 RNA5SP50-201ENST00000363731 107 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 SNORA9-201ENST00000384215 133 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 RNVU1-14-201ENST00000384770 164 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 MIR518D-201ENST00000385014 87 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 MIR483-201ENST00000385070 76 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 BX682237.1-201ENST00000415016 335 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 Z75741.1-201ENST00000446793 314 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 DYNLL1P5-201ENST00000467158 270 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 RPS29P25-201ENST00000481709 171 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 RN7SL20P-201ENST00000488827 297 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 RPS27P26-201ENST00000494583 239 ntBASIC2.94□□□□□ -1.94
SLC6A13Q9NSD5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms