Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-655P-201ENST00000362858 107 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-1210P-201ENST00000363775 107 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-560P-201ENST00000364007 108 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU5A-8P-201ENST00000364102 114 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU1-140P-201ENST00000365040 165 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 Y_RNA.311-201ENST00000365068 96 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 SMIM11P1-201ENST00000369586 178 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 MIR1282-201ENST00000408865 101 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-1025P-201ENST00000410629 104 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC138623.1-201ENST00000418060 216 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL513185.2-201ENST00000425543 193 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 MTND4P25-201ENST00000441039 533 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC003071.1-201ENST00000451219 789 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RPL30P6-201ENST00000475925 342 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 MTND1P3-201ENST00000484956 952 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC025465.3-201ENST00000510570 311 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-914P-201ENST00000516749 109 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC087894.1-201ENST00000538359 518 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL157871.3-201ENST00000557231 293 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC092325.1-201ENST00000566449 554 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 MIR1273C-201ENST00000578669 77 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC067959.1-201ENST00000604334 379 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL355472.4-201ENST00000610233 626 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL365204.3-201ENST00000612448 685 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 Y_RNA.783-201ENST00000613546 102 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AL121772.2-201ENST00000614331 297 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC123767.1-202ENST00000620407 817 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC099654.8-201ENST00000637757 681 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 AC092125.1-201ENST00000562568 1995 ntBASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC012618.3-205ENST00000637896 1496 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RNA5SP493-201ENST00000364115 91 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 SNORA22-201ENST00000383907 134 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 SNORA22C-201ENST00000384614 134 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MIR585-201ENST00000384887 94 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MIR758-201ENST00000390227 88 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MIR1285-1-201ENST00000408593 84 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RNU2-23P-201ENST00000410545 195 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 UBE2V1P10-201ENST00000414685 269 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RPL35AP12-201ENST00000425362 338 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RPS27P16-201ENST00000425758 201 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 BX510359.1-201ENST00000456973 237 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC087477.1-201ENST00000465747 340 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RN7SL807P-201ENST00000470923 297 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RPS26P55-201ENST00000471178 356 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 RN7SL636P-201ENST00000497504 294 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC026403.1-201ENST00000518938 295 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AP004247.1-201ENST00000531556 1289 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC079600.2-201ENST00000550076 130 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC012414.6-201ENST00000568241 401 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC012065.4-201ENST00000602445 679 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC078795.2-201ENST00000602835 1252 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 SNRPGP19-201ENST00000603826 189 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AL050343.2-201ENST00000607338 280 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC124016.2-201ENST00000610058 665 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC245297.2-201ENST00000610119 565 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MIR7112-201ENST00000616126 65 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 AC068205.3-201ENST00000636385 468 ntBASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
CDC42SE1Q9NRR8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-858P-201ENST00000362436 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms