Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AL078601.1-201ENST00000444542 271 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC013267.1-201ENST00000458227 267 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 RNU6-498P-201ENST00000459468 107 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC092757.1-201ENST00000467293 467 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC010409.1-201ENST00000487382 476 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 RPL22P13-201ENST00000493291 347 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AP000860.1-201ENST00000605250 559 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 BNIP3P19-201ENST00000605397 577 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AP001596.2-201ENST00000608410 312 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC017083.3-201ENST00000609955 700 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 AC106858.1-201ENST00000637497 429 ntBASIC0.08□□□□□ -2.4
SMCO4Q9NRQ5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 MIR888-201ENST00000401186 77 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 FTH1P15-201ENST00000406984 280 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AL139098.1-201ENST00000407291 389 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 RNU2-68P-201ENST00000410878 191 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 UBE2V1P9-201ENST00000414760 368 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 RPL36AP53-201ENST00000432891 316 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 Z82210.1-201ENST00000440037 231 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 JTBP1-201ENST00000441314 247 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AL512310.8-201ENST00000550183 120 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC009268.1-201ENST00000561352 1203 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AL022067.1-201ENST00000602426 454 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AP000942.3-201ENST00000603702 160 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC105129.3-201ENST00000605455 485 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AC096772.1-201ENST00000609146 564 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 AP005229.2-201ENST00000609980 697 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.07□□□□□ -2.4
SMCO4Q9NRQ5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 RNU6-98P-201ENST00000384173 107 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AL355615.1-201ENST00000406187 641 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 BPY2DP-201ENST00000422208 265 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AL121890.1-201ENST00000435457 205 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 SNRPFP3-201ENST00000457792 225 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 snoU13.23-201ENST00000458863 104 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 SNORD124-201ENST00000459577 104 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 RNU6-667P-201ENST00000517186 102 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 HSPA8P13-201ENST00000523715 472 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AL590705.4-201ENST00000532209 134 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AL049870.4-201ENST00000555741 486 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 MIR3945-201ENST00000581853 98 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AC022432.1-201ENST00000595739 310 ntBASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SMCO4Q9NRQ5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AC010099.3-201ENST00000423896 409 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 MTCO2P12-201ENST00000427426 682 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 GTF2IP13-201ENST00000438487 386 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 RNVU1-2-201ENST00000516326 135 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 RN7SKP88-201ENST00000516847 250 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AC015712.3-201ENST00000559380 164 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 7SK.8-201ENST00000612110 250 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 7SK.11-201ENST00000615477 250 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 AL158163.2-201ENST00000619110 700 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 7SK.13-201ENST00000622040 250 ntBASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SMCO4Q9NRQ5 RNU6-884P-201ENST00000363889 107 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 RNU4-12P-201ENST00000365233 139 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 SNORD14D-201ENST00000384390 87 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 RPL23AP32-201ENST00000395315 459 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC234064.1-201ENST00000436312 247 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC098831.1-201ENST00000440661 216 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 USP9YP34-201ENST00000453983 808 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 VPS26AP1-201ENST00000483197 979 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 HMGN1P13-201ENST00000505795 138 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC124947.2-202ENST00000552735 133 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 AL359821.1-201ENST00000605519 182 ntBASIC0.04□□□□□ -2.4
SMCO4Q9NRQ5 snoU13.31-201ENST00000607291 104 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms