Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AL139276.1-201ENST00000311910 1001 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.248-201ENST00000364501 109 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 SNORD115-7-201ENST00000365306 82 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 SNORA69-201ENST00000383895 132 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AL139039.1-201ENST00000401900 692 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RNU4-46P-201ENST00000410818 138 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RPS12P24-201ENST00000412619 387 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AL451074.5-201ENST00000415894 435 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 SNRPEP10-201ENST00000420249 274 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 MRPS10P2-201ENST00000431226 381 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 MTND4P25-201ENST00000441039 533 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 TRBV1-201ENST00000476502 284 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.704-201ENST00000516851 102 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 MIR4703-201ENST00000577728 79 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC008945.2-201ENST00000606056 604 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC116312.1-201ENST00000606841 314 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AL354950.2-201ENST00000617939 290 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC011155.2-201ENST00000623202 216 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
DDX4Q9NQI0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 UBE2L2-201ENST00000254302 429 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU6-1287P-201ENST00000362914 107 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.256-201ENST00000364594 104 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU6-1060P-201ENST00000384664 107 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNA5SP252-201ENST00000391131 119 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AL445529.1-201ENST00000398713 389 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AL591416.1-201ENST00000404015 867 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AL513328.1-201ENST00000446460 224 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 MTCO3P38-201ENST00000468910 766 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC104806.1-201ENST00000508720 308 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 TTC39CP1-201ENST00000512513 755 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RN7SKP219-201ENST00000516825 296 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU6-143P-201ENST00000516942 93 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 RNU6-835P-201ENST00000516974 104 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC091544.4-201ENST00000555268 342 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC092325.1-201ENST00000566449 554 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC008752.3-201ENST00000588113 712 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC098826.3-201ENST00000603823 466 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 NUTF2P8-201ENST00000604593 363 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC022893.3-201ENST00000607665 437 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 YWHAEP7-203ENST00000622054 312 ntBASIC3.18□□□□□ -1.9
DDX4Q9NQI0 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX4Q9NQI0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL049641.1-201ENST00000441055 1948 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 MIR26A1-201ENST00000362205 77 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.89-201ENST00000363031 102 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 RNU6-288P-201ENST00000363690 104 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 RNU6-1090P-201ENST00000364065 94 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.245-201ENST00000364493 95 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 RNU6-877P-201ENST00000383868 107 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 BTF3L4P3-201ENST00000418879 476 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC007919.1-201ENST00000429380 217 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC073415.1-201ENST00000449240 153 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC233702.1-201ENST00000482905 502 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX4Q9NQI0 RNU6-123P-201ENST00000516163 102 ntBASIC3.17□□□□□ -1.9
DDX4Q9NQI0 SNORD60.2-201ENST00000516883 86 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms