Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CASC19-280ENST00000642102 1351 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 NACAP2-201ENST00000318548 624 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU6-1167P-201ENST00000363227 94 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 Y_RNA.303-201ENST00000364998 94 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU1-100P-201ENST00000365255 165 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU4-20P-201ENST00000365601 151 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU6-741P-201ENST00000383889 107 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 SNORD37.1-201ENST00000390968 65 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU2-33P-201ENST00000410344 192 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNA5SP118-201ENST00000410385 109 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC080125.1-201ENST00000414888 684 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RPLP0P7-201ENST00000416050 667 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 UBE2D3P2-201ENST00000424409 445 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RPL36AP53-201ENST00000432891 316 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC009237.8-201ENST00000445492 379 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 SNRPFP3-201ENST00000457792 225 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 SNRPGP3-201ENST00000469405 227 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RPL39P36-201ENST00000490784 156 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 RNU4-29P-201ENST00000515943 174 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AF235103.2-201ENST00000525753 346 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 MIR4424-201ENST00000585257 86 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC010525.2-201ENST00000590920 195 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC098826.3-201ENST00000603823 466 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AL161798.1-201ENST00000604630 131 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AL627309.6-201ENST00000606857 840 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 MTND1P37-201ENST00000636562 264 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 AC093010.3-201ENST00000570269 15214 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SIX2Q9NPC8 OR4G1P-203ENST00000641984 1631 ntBASIC2.79□□□□□ -1.96
SIX2Q9NPC8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 Y_RNA.534-201ENST00000384599 112 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MIR514A2-201ENST00000385131 88 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MIR514A3-201ENST00000385132 88 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 RNU6-1197P-201ENST00000391183 107 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 CISD1P1-201ENST00000393907 327 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MIR887-201ENST00000401258 79 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AL606923.1-201ENST00000406616 190 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC007390.1-201ENST00000415722 356 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 BTF3L4P3-201ENST00000418879 476 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AL139281.1-201ENST00000422120 335 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MTND3P16-201ENST00000452205 344 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MTCO3P9-201ENST00000506989 781 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 RNU6-914P-201ENST00000516749 109 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC090136.1-201ENST00000520009 240 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 CKS1BP7-201ENST00000522230 235 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AP001804.3-201ENST00000525146 880 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 ATP5F1P5-201ENST00000526403 760 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 ZNF192P1-203ENST00000565888 810 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AL670379.4-201ENST00000605279 254 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC005000.2-201ENST00000605468 310 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 MIR15A-201ENST00000607334 83 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC107294.1-201ENST00000609524 467 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC006504.8-201ENST00000621046 635 ntBASIC2.78□□□□□ -1.96
SIX2Q9NPC8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
SIX2Q9NPC8 AC007785.2-201ENST00000598627 1916 ntBASIC2.78□□□□□ -1.97
SIX2Q9NPC8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC090740.1-201ENST00000623193 2262 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU6-512P-201ENST00000364438 103 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU6-116P-201ENST00000384042 109 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU6-38P-201ENST00000384085 107 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 MT-TL1-201ENST00000386347 75 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.604-201ENST00000410574 102 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU2-52P-201ENST00000410680 190 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU6-373P-201ENST00000411247 98 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC138393.2-201ENST00000414742 246 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 SRIP2-201ENST00000428470 166 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC007919.1-201ENST00000429380 217 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms